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Name : HPIN_01650 (HPIN_01650) Accession : YP_005781669.1 Strain : Helicobacter pylori India7 Genome accession: NC_017372 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 329327 - 331252 bp Length : 1926 bp Strand : - Note : COG0021 Transketolase DNA sequence : ATGCGATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCCAACACATTGCGCTTTTTGTGCGCGGACATGATAGA TAAGGCTAATAGCGGGCATCCGGGCGTGTGCTTGGGGTTAGCTGATGTGATGGTGGTTTTAAGCTTGCATTTAAACCTTA ACCCCACTAACCCTAAATGGCTCAACAGAGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGTTTAGAAGATTTAAAGCGTTTCAGGCAATTACACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAGATTACAACAGGCCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGTCAATACGCTCAAAACCTTTTAGATAAACAAGCCATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGTGCTTCTTTAGCCGGGCACCTCAACTTAAACAATCTCATTGTGATTTATGACAG CAACCAGATCAGCATTGAAGGCGCTATCAATATTAGTTTTAGCGAACAGGTTAAGATGCGTTTTTTAGCGCAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCGATTCATAACGCTTTAGAAGAAGCCAAAAAATCCCATAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGGGCTGTTGGTTTAGAGGGGAGTGAAAAAACGCATGGCTCGCCTTTAAA TAAAGAAGTGTTAAAACAATCCAAAGAAAGCGCTCAAATCAATCCTGATGAAAGCTTTATCATTAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGTGCTAGTTTAGAAGCCTTATGGGAAAAATCCTTAAGCCCTAAAACAAAAGAA AAAATCCATGCGTTAAAGGATTTTGATTTTAGCGCCATCAATTACCCCACCTTTAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGGGTTTTTTGGGAGGGAGCGCGGATTTAGCCCCGT CTAATAACACGCAGTTAAAACATTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGTTTGTTTGTGCCTTTTTGTGCGACCTTTTTTGTGTTTAGCGATTATTT AATGCCCAGCATTCGTTTGAGTGCTTTAATGAAACTGAAAGCCCTTTTTATCTTCACGCATGACAGCATTGGCGTGGGCG AAGACGGGGCCACGCACCAGCCTGTAGAACAATTGAGCCATTTGCGCGCTTTGCCCAATTTCTATGCTTTCAGACCCAGC GACGCTTTTGAAAACACCGCTTGCATGCAAGTAGCGTTAAGTTTGAACGCTCCTAGCGGGCTTATTTTATCGCGCCAGAA TTTACCCGTGCTTGATGAGGTCTCTAAAGATCAGGTTTTAAAAGGGGCGTATGTTAAACACCACTCTAAAGATCCCATTA TCACGCTCGTTGCGAGTGGGAGCGAAGTTTCTTTGGCTTTAGAGAGCGCTAAAATTTTAGAGCGAGAAAATATCCCCACT CAAGTGGTGAGCGCGCCATGCTTTGATTTATTGATAGAGCAAGATGAAAGCTATCTTAAAGAACTCTTTAAAGGTAAAGT TTTAGTCATTGAAGCGAGCCGTGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGTT CAGCAAAGGGCGATAAACTCTTTGAAAAATTCGGCTTCAGCGTTGAAAACACCACCACTCAAGCTAAAAGGTTACTCAAC GCATGA Protein sequence : MRLSNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKRFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKQAISHKVYCLCGDGD LQEGISYESASLAGHLNLNNLIVIYDSNQISIEGAINISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEAKKSHKPT LLIAHTIIGKGAVGLEGSEKTHGSPLNKEVLKQSKESAQINPDESFIISPKNKMHFEEVKVRGASLEALWEKSLSPKTKE KIHALKDFDFSAINYPTFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTQLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFVPFCATFFVFSDYLMPSIRLSALMKLKALFIFTHDSIGVGEDGATHQPVEQLSHLRALPNFYAFRPS DAFENTACMQVALSLNAPSGLILSRQNLPVLDEVSKDQVLKGAYVKHHSKDPIITLVASGSEVSLALESAKILERENIPT QVVSAPCFDLLIEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENTTTQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 5e-97 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 6e-87 | 41 |
