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Name : HPIN_08295 (HPIN_08295) Accession : YP_005782920.1 Strain : Helicobacter pylori India7 Genome accession: NC_017372 Putative virulence/resistance : Unknown Product : putative outer membrane lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 1656018 - 1656833 bp Length : 816 bp Strand : + Note : COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen DNA sequence : ATGAATGCATTCAAGCGTATTATTTGCATAACTGCTATCGTTTTAGGTTTTTTTAATCTCTTAGACGCCAAACACCACAA AGAAAAAAAAGAAAACCACAAAATCACTCGTGAGCTTAAAGTGGGCGCTAACCCTGTGCCGCATGCGCAAATTTTGCAAT CAGTCGTGGACGATTTGAAAGAGAAAGGGATCAAATTAGTGATCGTGTCTTTTACCGATTATGTGTTGCCTAATTTAGCA CTCAATGACGGCTCTTTAGACGCGAATTACTTCCAGCACCGCCCTTATTTGGATCGGTTTAATTTGGACAGAAAAATGCA CCTTGTTGGTTTGGCCAATATCCATGTGGAGCCTTTAAGGTTTTATTCTCAAAAAATCACAGACATTAAAAACCTTAAAA AAGGCTCAGTGATTGCTGTACCAAATGATCCGGCCAATCAAGGCAGGGCGTTGATTTTACTGCATAAGCAAGGGATTATC GCTCTCAAAGACCCAAGCAATCTATACGCTACGGAGTTTGATATTGTCAAAAACCCTTACAACATCAAAATCAAGCCTTT AGAAGCCGCATTATTACCTAAAGTTTTAGGGGATGTGGATGGGGCTATTGTAACAGGGAATTATGCCTTGCAAGCAAAAC TCACCGGAGCCTTATTTTCAGAAGACAAAAACTCGCCTTATGCCAATCTAATAGCCGCTCGTGAGGATAACGCGCAAGAT GAAGCCATAAAAGCGCTGATTGAAGTTTTGCAGAGCGAAAAGACCAGGAAATTTATTTTGGATACCTATAAGGGAGCGAT TATCCCGGCTTTTTAA Protein sequence : MNAFKRIICITAIVLGFFNLLDAKHHKEKKENHKITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA LNDGSLDANYFQHRPYLDRFNLDRKMHLVGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPANQGRALILLHKQGII ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKNSPYANLIAAREDNAQD EAIKALIEVLQSEKTRKFILDTYKGAIIPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 8e-35 | 41 |
