|
Name : HPIN_08100 (HPIN_08100) Accession : YP_005782885.1 Strain : Helicobacter pylori India7 Genome accession: NC_017372 Putative virulence/resistance : Unknown Product : integrase/recombinase XercD family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1619056 - 1620129 bp Length : 1074 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGAGTGATTGCAAAATGAGTAGGGTTAGTAGGGAATTGTTTAATAATATTAAGTCATTTTTACACTATAAGCTTAAAAC AATGATACGCATTCAAAGCATGAATGATTTACAATTGGTCTTAAAATGGCAGGATAGAGTTTTAGAGTGCCAAAGTCTTA TCGCATTGAAAGAACTCAATCGCAAGCTTTATAATCAAGGCATTAGGCATACGATTATGATGCAAGGCTTGTTTTTGTTC TTTGAATATTTTGATAATAGGATTAAGCTCAAATCCTTGCACAATCTAGCAGAAGAACAGGTTATAGACTTCTTATTTGG ATTAGCCAAAAACAGGAAGCCAAGCTCTATGGCTAAATATGTGATGTATTTAAGACAATTCTTTGATTATTTAGACAGAA AAAGAAACTATAGCTTTGATTTTGAACTTAAAAATCTATCGTTTGCCAAGAAAGAAACGCATTTGCCTAAGCATTTGAAT AAAAATGATTTTAAGGCTTTTATCCAAGCTCTTCTAAAATACCATCCCAAAACCAGTTTTGAAAAACGCAATCAGTGTAT TTTACTGCTTATTGTATTAGGGGGGTTAAGGAAGTTTGAAGCCTTAGATTTGGAGCTAAAAAACATTGCTTTAGAAAATA ACCACTACCGCCTTTTAATCAAAGGCAAAAACAACAAAGAGAGATACACTTATATTGAAAAAGAGTTTTTGCAAGTTCCT TTGAATGCGTGGCTAAGCGATATTAAACGATTAAAGAGTTTTAAGGGGCGTTTTGTGTTTAAGAAAGCAAAAAACAACAC CACACAAAAAACTTGCTCTTTAAAGGGCTTTATCGCTAAAATTTTTAAGCTCTCTAATATTGATGTAAAATCTTATGGAT TAGGTTTGCACCTTTTTAGGCATAGTTTTGCTACTTTTATTTATGATGAAACACAGGATTTGGTTTTAACTTCAAGAGCG TTAGGGCATAGTTCTTTGCTTTCTACTAAAATCTATATCCATACCACTCAAGAACACAATAAAAAAGTGGCTCTTGTGTT AGGGGGGTTATTAAGAAATGAAAAAAGCGAGTAG Protein sequence : MSDCKMSRVSRELFNNIKSFLHYKLKTMIRIQSMNDLQLVLKWQDRVLECQSLIALKELNRKLYNQGIRHTIMMQGLFLF FEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYLRQFFDYLDRKRNYSFDFELKNLSFAKKETHLPKHLN KNDFKAFIQALLKYHPKTSFEKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYTYIEKEFLQVP LNAWLSDIKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 2e-162 | 99 |
