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Name : HPIN_07710 (HPIN_07710) Accession : YP_005782811.1 Strain : Helicobacter pylori India7 Genome accession: NC_017372 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1550555 - 1551802 bp Length : 1248 bp Strand : + Note : COG0172 Seryl-tRNA synthetase DNA sequence : ATGATTGATAAAAAACTTTTATTGCAAGATTTTGACAGGGTGGCTCTTTCTTTAAAAAAGCGTAATAATGCGATGGATGA TGAGTTGGAGCGTTTGCGCGAAGTCATCACGCGTTATAAAAAGCAACTCATTGAATTAGAAGGCCTGCAAGCCTTTCAAA ACAAGGTTTCTAAAGAATTTGGTATCAAAATGGCTCAAAAAGTGGATACAAGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTATAAAAGCGTGGACGAATTGGAGCAACAAATTGATTTGAAGCTTTCTATAATCCCTAA TCTGGTGGATGAAAAAACCCCTTTAGGCGCAAGCGAAGAAGACAATATAGAAATTAAAAAAATCTTAACCCCCAGGGTTT TTACTTTCAAACCCAAAGAGCATTTTGAACTCGCTCAACAAAATGGCTGGATTGATTTTGAAAGCGGCGTGAAACTCGCC AAAAGCCGTTTTTCGGTCATCAGGGGTTTTGGGGCTAAAATTTATCGCGCACTCATTCATTTGATGTTGGATTTTAATGA AAAAAATGGCTTTGAAATCATTTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACCGGGCAATTACCCAAAT TCAAAGAAGACGTTTTCAAAATAGAAAATGAAAATTTGTATTTAATCCCCACCTCTGAAGTAACGCTCACTAATCTCTAC AACGACACGATTGTTAGCGTTGAAAATCTCCCCATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGCGAAGCAGGGAG CGCAGGCAAGGACACAAGGGGGATGATAAGACAGCACCAGTTTGATAAAGTAGAGCTTGTGGCTATCACGCACCCTAAAG AAAGCGATGCGATGCAAGAGTGCATGCTAGAGAGCGCGAGCGAAATTTTAAAGGCTTTGGAATTACCGCACCGGTTCGTG CAATTGTGCAGTGGGGATTTAGGCTTTAGCGCAAGCAACACGATAGATATTGAAGTGTGGCTGCCCGGGCAAAATTGCTA CAGAGAAATCAGCTCGGTGTCTAACACGAGGGATTTCCAGGCTAGGCGCGCCAAAATCCGTTTCAAAGAAAATCAAAAAA ACCAATTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATCCACATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDKKLLLQDFDRVALSLKKRNNAMDDELERLREVITRYKKQLIELEGLQAFQNKVSKEFGIKMAQKVDTSDLKKELENN KIKLNELYKSVDELEQQIDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTSEVTLTNLY NDTIVSVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQECMLESASEILKALELPHRFV QLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-76 | 46 |
