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Name : HPGAM_05115 (HPGAM_05115) Accession : YP_005780711.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Virulence Product : competence protein Function : - COG functional category : - COG ID : - EC number : - Position : 1039276 - 1040523 bp Length : 1248 bp Strand : + Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAAAAAACTTCTTTTACTCTTGGAGTATAAGATCGTAAAAATTGGATTAATTATTGTGATTGTGTTAGTGGGTTTTTT TCTTTTTTATGAACAAGAAATCAAAGAAAAAGCTGTTAATGTTTCTCAAGGTAAATTCCCTACTTCATCTTATTTGTTTC AAGCTTACGAAGGTATTAAGAATAAAATAGATACCATCAGTCAAGTGAAGCCAAACGATGAAACTAAAAGCGTTAATGAG AATATAGAAAAAACACAAAAAGATTTAGATGATTTTAATGCACTAGTGCAAAAGTTACCAAATTTGCCTAAGGGTTTTAA TAAAACACTTATCAAACCACAAAGTCCATTTTTCAACTACAGTACCGCCAACAAAGATGAAAAAACCCGTTTGGTGATTT TAGCGTCTCGTATTAGCGGCCAAAAAGAAACGCAACCTCCCATTTCTATAAAGGATAGCGTTTCTCACATAAAATCTAAA GAAAAACGAGAGCTTGAAAAAGAATACGGCTCTAGCGGGTTTAAAACTTTTAAAAGAAAAAATGTAGCGAGCAGTGAAAA CAAACTTTTAAGAACGATTACAGCTGACAGGATGATCCCAGCCATTCTGATCACTCCTATTAGCAGTGAAATAGGGGGGA GTAAGATAGTCGCTCAAGTGGAGAGCGATATATACGCAACGATGGGTAGAGCGGTTTTAATCCCTAAAGGGAGTAGAGCC ATAGGCTATTACAACTCTAATAATAAAATAGGAGAATACCGATTAGAAATTGCTTGGAACAGGATCATCACGCCACAAGG GGTTAATATTATTTTAAGCGATGCTAAGGGAGCTGATGTTAAGGGCTATAACGGCATGATAGGCACGCTCCATAACAAAT ATTGGGAACGCTATGGTATCCCCTTATCCTTAAGCACTTTGTCAAACGGACTACTCATAGGACTTACTAGCGGTCTTACC GAAGCGATGAAAAACAAAAGGGGTGGCTTTAATCAAAACTATTTTGGAGATTACATGATGATGCAAATGACAAGACAAAC TGGTATCAGCCTGAATAACATTATCGCTCAAATCATGCGAGAGCAAATTAGGATTAAGCCCATTATCACTATTAGAGAAG GAAGCCATATTTTTATTAGTCCTAATACGGATATTTGGTTTCCTATCCCTAAAAACAATGAGGTCTTAGCGGAATTTTTT AATGAAGAAAAGGAGCAAAACAATGATACAAAATATAACTATTTATAA Protein sequence : MKKLLLLLEYKIVKIGLIIVIVLVGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIKNKIDTISQVKPNDETKSVNE NIEKTQKDLDDFNALVQKLPNLPKGFNKTLIKPQSPFFNYSTANKDEKTRLVILASRISGQKETQPPISIKDSVSHIKSK EKRELEKEYGSSGFKTFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA IGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT EAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAEFF NEEKEQNNDTKYNYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB10-1 | YP_002301098.1 | VirB10 type IV secretion protein | Virulence | cag PAI | Protein | 1e-134 | 79 |
