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Name : HPGAM_05110 (HPGAM_05110) Accession : YP_005780710.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Virulence Product : conjugal plasmid transfer system protein Function : - COG functional category : - COG ID : - EC number : - Position : 1038062 - 1039279 bp Length : 1218 bp Strand : + Note : COG3504 Type IV secretory pathway, VirB9 components DNA sequence : ATGACTACCACCTTTATTTTTGATAATGATCCTATTATCTATGTGAGCTTAGGAGATCCTAGCGGTTTTGAACTCACTTA TCCTACTAATGATCATTACGATTTGTCTAACATGCTAGTGATCAAGCCGTTACTTATAGGGGTGGATACGAACCTAACCG TAGTCGGAGCGAGCGGCACAATTTATACCTTTTATTTGTTTAGCACCACTTACACCAGCAAATTTCAAAGCTATTTTTCA GTGTTTGTTTCTAATAAAAGATCTATCGGCAAGCTCAATATTCTGTCTAAGAGCGAGTTAGAAAAAAGGGAGCAAGAACA ATTGGCTAAAACAGAAACAAATAACTTTAATAAACAAGATAAGCACAAGCTTGACTACAGAAAAATCAATTATGAGAGCA AGGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAAGTCAATCACATTTTCATTGAAAAAGCTAAAATCAATCGT GGTTATTTGCAAAACCCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGACGCGCTTGA TATAAAGGCGCTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATATGACAGGGATCAAGCCTTTTCAAAATTTC CTTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTACATTATTGCTGAAGAC GTTTCTAAAAAATGGACTTTAAGGAGTGGTAAGGAATACGTGTGCGTGAGAAGAGACAAGCGCAAATACCAAAAGTCTAA GGACTTCATGCTTTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGCCAAACGAAATAACATTCACTTGATTGAAG ACACTACGCCTCAACCTAAAAATGCCATTAGCGTAACGGAGTTGTTAGCTCAAATCAAAAACCAAACTCCAAGCAAAGAA TACCGAGCCTTAAATGAAGAAGAAGTTAATACTTTAGAAGAGGTTAAAAACATCATAAAAGCTCCTAAGCCTTTGCAAAA AGATTTGAAAAACAAGCTCAAAAAACACACCATCAAAACCCAGTATTGCGTGCCTATCCCCTATATAGAAAGACTAAAAA CCACTGATGGTTTAAAAAAGAATAAAAAAGGGCAGGATACCACCCCAAAACAAAATCAAGCGGACCCTATTAAAGGGGAT AAAGAAAACAAGAAATGA Protein sequence : MTTTFIFDNDPIIYVSLGDPSGFELTYPTNDHYDLSNMLVIKPLLIGVDTNLTVVGASGTIYTFYLFSTTYTSKFQSYFS VFVSNKRSIGKLNILSKSELEKREQEQLAKTETNNFNKQDKHKLDYRKINYESKEIDDGKFIRIGDEVNHIFIEKAKINR GYLQNPKHKRTWWSLWLYKKPSDDALDIKALDVFDDGKYTYFRYDRDQAFSKFPYTYKVVDGYDNPINSRVVGNYIIAED VSKKWTLRSGKEYVCVRRDKRKYQKSKDFMLLKRLLEQDEAMKAKRNNIHLIEDTTPQPKNAISVTELLAQIKNQTPSKE YRALNEEEVNTLEEVKNIIKAPKPLQKDLKNKLKKHTIKTQYCVPIPYIERLKTTDGLKKNKKGQDTTPKQNQADPIKGD KENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 5e-157 | 94 |
