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Name : HPGAM_04385 (HPGAM_04385) Accession : YP_005780577.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Unknown Product : type I restriction enzyme M protein Function : - COG functional category : - COG ID : - EC number : - Position : 886073 - 887728 bp Length : 1656 bp Strand : - Note : COG0286 Type I restriction-modification system methyltransferase subunit DNA sequence : ATGAAACCTTTAAAGGCTAAAAACGCCAAACAAAACCGCCAATCAAAACACAAAAAAGGGGCTTATCTCATGGAAAACAC AAACAAAGCGAGCGCGAAATTGAATAACCATGCTTCATTGGAGCGTAACGAATTACACAACACCATTTGGAAAGTGGCGA ACGAATTGAGAGGCTCAGTGGATGGCTGGGATTTCAAGCAATACGTTTTAGGCATTCTCTTTTACCGCTACATTTCAGAA AACATGGCTAATCACCACAATGAATACGAGCGAAAGCTTGATCCGAACTTTGATTACGCTTCATTAAGCGATGAAGAGGC TGAAATCGTAAGAAAATCAACCATTGAAGAAAAAGGCTTTTTCATCCCGCCAAGCGCTTTATTTTGTAACGTGTTAAAAA ACGCGCCCCATAACGAAGATCTCAATGTAACCTTACAAAATATTTTCACCGAAATAGAAAAATCCAGCCTTGGCACTCCA TCAGAAGAAAACGTCAAAGGCTTGTTTGCGGATTTAGACGTCAATAGCAACAAATTAGGGAGCTCTCATCAAAATAGGGT GGAAAAATTGACTAAAATCCTTCAAGCCATAGGGGGCATGCAATTAGGCGACTACCAACAAAGCGGGATCGATGTTTTTG GCGACGCTTATGAATATTTAATGGCGATGTATGCGAGCAATGCCGGCAAAAGCGGAGGGGAATATTTCACCCCCCAAGAA GTGAGCGAACTGCTCGCTAAAATCACCCTGCACAACCAAGAGAGTATTAATAAAGTTTATGACCCATGCTGCGGGAGCGG GAGCTTGCTCTTACAATTTTCTAAAGTGTTGGGCGATAAAAACGTCTCAAAAGGGTATTTTGGGCAAGAAATCAATTTGA CCACTTACAACCTCTGCCGTATCAACATGTTTTTGCATGACATCAATTATTCTAAATTCCACATCGCGCTAGGGGACACG CTTTTAGACCCAAAGCATGAAGACGATGAGCCTTTTGATGCGATCGTTTCCAACCCTCCCTATTCCACTAAATGGGTGGG CGATAACAACCCCCTTTTAATGAACGATGAGCGTTTTAATAAGGCCGGCGCGCTAGCGCCCAAAAACGCCGCCGATCTCG CCTTCACCATGCACATGCTTTCTTATTTATCCAATCAAGGCGCTGCTGCGATCGTGGAATTTCCCGGGGTGCTTTATAGA GGCGGTGCCGAAAAGAAAATCAGAGAGTATTTAGTCAAAGAGAATTTCATTGACTGCGTGATCGCTTTACCTGAAAACCT CTTTTTTGGAACGAATATCGCTACTTGCATTTTGGTGCTTAAGAAAAACAAAAAAGACGACACCACGCTTTTTATTGATG CGAGTAAGGAATTTGTCAAAGAGGGCAAGAAAAACAAACTCAAAGAGCGCAACCGAGAAAAGATTTTGCAAACTTATATT GAAAGGAAAGCCATCAAGCATTTTGCGGCTCTAGCCAATATAGAGAAAATCCAAGAAAACGATTACAACCTATCCGTCAA CCGCTACGTGGAGCAAGAAGACACCAAAGAAATCATTGACATTAAGGCGCTTAATGGTGAGATTTCTCAAATCGTAAAAA AACAGAGCGCTTTAAGAAACAGCCTTGAATCCATCATTAAAGAGCTAGAAGCTTAA Protein sequence : MKPLKAKNAKQNRQSKHKKGAYLMENTNKASAKLNNHASLERNELHNTIWKVANELRGSVDGWDFKQYVLGILFYRYISE NMANHHNEYERKLDPNFDYASLSDEEAEIVRKSTIEEKGFFIPPSALFCNVLKNAPHNEDLNVTLQNIFTEIEKSSLGTP SEENVKGLFADLDVNSNKLGSSHQNRVEKLTKILQAIGGMQLGDYQQSGIDVFGDAYEYLMAMYASNAGKSGGEYFTPQE VSELLAKITLHNQESINKVYDPCCGSGSLLLQFSKVLGDKNVSKGYFGQEINLTTYNLCRINMFLHDINYSKFHIALGDT LLDPKHEDDEPFDAIVSNPPYSTKWVGDNNPLLMNDERFNKAGALAPKNAADLAFTMHMLSYLSNQGAAAIVEFPGVLYR GGAEKKIREYLVKENFIDCVIALPENLFFGTNIATCILVLKKNKKDDTTLFIDASKEFVKEGKKNKLKERNREKILQTYI ERKAIKHFAALANIEKIQENDYNLSVNRYVEQEDTKEIIDIKALNGEISQIVKKQSALRNSLESIIKELEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0053 | YP_300143.1 | type I restriction-modification system methyltransferase subunit | Not tested | SCC15305cap | Protein | 8e-92 | 42 |
