|
Name : HPGAM_04240 (HPGAM_04240) Accession : YP_005780548.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.3 Position : 859696 - 860961 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGCGTGGGGAGTGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATTAAAGATAGGGCCGGCGTGGAAATTAAAATTAAAAAAGCGGTGGTGCGAGATGTGAAAAAGCACAAGGGCT ATGCTTTTGAAATCAGTGATGATTTAGAAAGCGTGATAGAAGATAAAGAAATTGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTAGC GTACCACCGCTATGAATTAGAACAAACCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGTAATTAT ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCACAACATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAGGGCATTGATGCGGCGCACAAATTATTGATTTTAGCGTCTTTAGCGTATGGCATTGATG CGAAATTAGAAGAAATCTTGATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAGTTTGCTAAAGAATTTGGTTAT AACATCAAACTTTTAGGCATCGCTAAAAAACACCAGGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAACGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTCATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGAGCTGGAGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTGGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGCTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCCCAAAATGATATTTCGCTCAACAATGTCTTGC AAAAAGAAATCCCGCAATCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAATCTATGCTGAACGCT CTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCTAAGATGATTCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIKIKKAVVRDVKKHKGYAFEISDDLESVIEDKEIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQTAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY NIKLLGIAKKHQDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEIPQSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 1e-68 | 42 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 1e-68 | 42 |
