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Name : HPGAM_03920 (HPGAM_03920) Accession : YP_005780486.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 795638 - 796951 bp Length : 1314 bp Strand : + Note : COG2056 Predicted permease DNA sequence : ATGCTAGAAAATAGCTCTGTATGGAGCAATCCTGCCTTTGTGGCCATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATTAGCGCGACTCTCATAGCAGGGCTTATGGGAGGGCTTGGGATCACGGAGAGTTTTAACG CGATGATAGACGGCATGAAAGGCAATTTAAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAACCTCATTAAAGTCGCTTTGAATAAATTAATAGGCTTAATGGATTACAAGCGATCCACTTTTTGCTTTTTGAT CGCTTTCATCGCATGTTTTTCGCAGAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC ATTTGATGAATCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGCACTTTAACCTTTGGCTTGCAAGCCCCCTACTTGGTG CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTGAAAGCCAATGGCGTTAGCACCACCATAGC GCAAATCACAGGAGTGATGTGGATAGCAGGATTAGCGATGGTCGTTGGGCTATTTTTAGCCGTATTAACGCTATACAAAA AACCCAGGCGCTACCAAGAAAAATCTTTTAATATAGAAGATTACGCCTCGCTTCAATTAAACTACCATGACTATTTGACT TTTATAGGAATTATCGTGGCGTTTGTGATCCAATTAGCCACCGATTCGATGCCCTTAGCCGCCTTTTTAGCGTTAGCGAT CATCTTATTAGGCCGTGGCATTAAGTTTAAAGAAACAGACTCGCTTATGGATGATAGCGTGAAGATGATGGCGTTTATCG CTTTTGTGATGTTAGTGGCTAGCGGGTTTGGGGAAGTGTTGCAAAAAGTGCATGCGATAGATGGCTTAGTGAATGCGATC ACAAGCGTGATCCAAGGGAAGTTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTTTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATTCCTATTATTGCTGTGTTTTATGTCCCTTTATGCGCGAAATTAGGATTCAGCACAGAATCTACGA TTTTACTCATCGGCATAGCCGCAGCCTTAGGCGATGCAGGCTCGCCGGCTAGCGATAGCACCATGGGGCCTACTTGCGGA CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATTGT TTTTGGAGTGGTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSVWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGITESFNAMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALNKLIGLMDYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACTLTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSTTIAQITGVMWIAGLAMVVGLFLAVLTLYKKPRRYQEKSFNIEDYASLQLNYHDYLT FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIDGLVNAI TSVIQGKFLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSTESTILLIGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLIVFGVVGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 5e-59 | 42 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 5e-59 | 42 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 4e-59 | 42 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 4e-59 | 42 |
