Gene Information

Name : HPGAM_03335 (HPGAM_03335)
Accession : YP_005780384.1
Strain : Helicobacter pylori Gambia94/24
Genome accession: NC_017371
Putative virulence/resistance : Virulence
Product : UTP--glucose-1-phosphate uridylyltransferase subunit GalU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 674385 - 675206 bp
Length : 822 bp
Strand : +
Note : COG1210 UDP-glucose pyrophosphorylase

DNA sequence :
ATGATTAAAAAATGCCTTTTTCCTGCCGCTGGCTATGGCACGCGCTTTTTGCCGATCACTAAAACCATCCCTAAAGAAAT
GCTACCCATTGTGGATAAGCCTTTGATCCAATACGCTGTGGAAGAAGCGATGGAAGCGGGCTGTGAAGTGATGGCGATCG
TTACGGGCAGGAATAAACGCAGTTTAGAAGATTATTTTGACACGAGCTATGAAATAGAGCATCAAATCCAAGGCACTAAC
AAAGAAAACGCCTTAAAAAGCATTCGTAACATTATAGAAAAATGCTGTTTTTCCTATGTGCGCCAAAAGCAAATGAAAGG
CTTAGGGCATGCGATTTTAACCGGGGAAGCCCTCATAGGCAATGAGTCTTTTGCGGTGATTTTAGCCGATGACTTGTGCA
TAAGCCATGATCACCCAAGCGTGTTAAAGCAAATGACTTCGTTGTATCAAAAATACCAATGTTCCATTGTAGCCATTGAA
GAAGTGGCGTTAGAAGAAGTTTCAAAATACGGCGTGATTAGGGGCGAATTGTTAGAAGAGGGGGTGTATGAGATTAAAGA
CATGGTGGAAAAACCAAGCCAAGAAGACGCCCCAAGCAATCTGGCCGTCATTGGGCGCTACATTTTAACTCCGGATATTT
TTGATATTTTGCGTGAGACTAAACCGGGTAAAAACAATGAAATCCAAATCACAGACGCCTTACTCACTCAAGCCAAAAGA
AAACGGATCATCGCTTACCAATTCAAAGGCAAGCGATACGATTGCGGGAGCGTGGAAGGCTATATTGAAGCGAGTAACGC
CTATTATAAAAAACGCTTATAA

Protein sequence :
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN
KENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNESFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIE
EVALEEVSKYGVIRGELLEEGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFDILRETKPGKNNEIQITDALLTQAKR
KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 4e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPGAM_03335 YP_005780384.1 UTP--glucose-1-phosphate uridylyltransferase subunit GalU VFG0964 Protein 3e-54 47