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Name : HPGAM_02695 (HPGAM_02695) Accession : YP_005780262.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Y VirB10-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 537102 - 542918 bp Length : 5817 bp Strand : - Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAATGAAGAAAACGATAAACTTGAAACTTCTAAAAAAGCCCAACAAGATTCACCCCAAGATCTATCTAATGAAGAAGC AACAGAAGCCAATCATTTTGAAGATCTTTTAAAAGAAGAAAGCTCAGACAATCATCTTGACAACCCCACAGAAACTAAAA CCCATTTTGATGAAGACAAGCTAGAAGAAACCCAAACTCAAATGGATTCTGGAGGTAATGAAACTTCAGAATCTAGCAAT GGCAGTCTGGCAGACAAGTTATTCAAGAAAGCCAGAAAATTAGTTGATGATAAAAGACCTTTCACTCAGCAAAAGAGTTT AGATGAAGAAGCCCAAAAACTGAACGAAGAAGATGATCAAGAAAATAATGAGCATCAAGAAGAAACTCAAACGGACTTGA TTGATGGTGAAACTTCTGAAAAAGCCCAACAAGATTCACCCCAAGATCTATCTAATGAAGAAGCAACAGAAGCCAATCAT TTTGAAGATCTTTTAAAAGAAGAAAGCTCAGACAATCATCTTGACAACCCCACAGAAAGTTCAGACAATCATCTTGACAA TTCCGCAGAAACTAAAACCCAAGAAACTAAAACCCATTTTGATGAAGACAAGCTAGAAGAAATAACTGACGACTCTAACG ATCAAGAGATTATCAAAGGAAGCAAAAAGAAATACATTATTGGCGGCATTGTAGTCGCTGTTCTTATCGTGATTATTTTA TTTTCTAGAAGCATTTTTCACTACTTTGTACCTTTGGAAGATAAAAGCTCTCGTTTTAGCAAAGACAGGAATCTTTATGT CAATGATGAAATCCAAATAAGGCAAGAGTATAACCGATTGCTGAAAGAACGGAATGAAAAAGGCAATATGATCGATAAGA ATCTTTTCTTCAATGACGATCCCAATAGAACCTTATACAACTATTTGAATATTGCAGAAATTGAGGACAAAAACCCATTG AGAGCCTTTTATGAGTGTATTAGTAATGGTGGCAACTATGAAGAATGTTTGAAGCTTATCAAAGACAAAAAACTTCAAGA TCAAATGAAAAAGACTCTAGAGGCTTATAACGACTGCATCAAAAATGCCAAAACTGAAGAAGAAAGGATCAAGTGTTTAG ATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTACTGAACCAACAAAAAGTTCAAGTGGCTCTAGATTGTTTGAAAAAC GCTAAAACCGATGAAGAACGGAAAGAGTGCCTAAAACTCATAAATGACCCTGAGATTAGAGAGAAATTCCGCAAGGAATT AGAGCTTCAAAAAGAGCTTCAAGAGTATAAGGATTGTATCAAAAACGCCAAAACAGAAGCTGAGAAAAACGAATGCTTGA AAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAACAACAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAA CGAAACGAGTGCTTGAAAAATATTCCCCAAGACTTGCAAAAAGAACTACTAGCTGATATGAGCGTCAAGGCTTACAAGGA CTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTACTCACGCCTGAAGCGAAAAAAAAGTTAG AACAACAGGTTCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAAAAAGTGTTTGAAAGATCTCCCTAAAGAC TTACAAAGCGATATTTTAGCTAAAGAGAGCCTGAAAGCTTATAAAGACTGCGCATCTCAAGCCAAAACTGAAGCCGAAAA AAAAGAATGCGAGAAATTACTCACGCCCGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAGGCTTATT TGGATTGCGTATCTCAGGCCAAAACTGAAGCTGAGAAACAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAAAAAAAAG TTAGAAGAAGCTAAAAAAAGCATTAGGGTTTATTTGGATTGCGTATCAAAAGCCAAAAACGAAGCCGAAAAAAAAGAATG CGAGAAATTACTCACGCCCGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCG TATCTCAGGCCAAAACTGAAGCTGAGAAACAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAAAAAAAAGTTAGAAGAA GCTAAAAAAAGCATTAGGGTTTATTTGGATTGCGTATCAAAAGCCAAAAACGAAGCCGAAAAAAAAGAATGCGAGAAATT ACTCACGCCCGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAGG CCAAAACTGAAGCTGAGAAACAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAA AGCATTAGGGTTTATTTGGATTGCGTATCTCAGGCCAAAACTGAAGCTGAGAAACAAGAATGCGAGAAATTGCTCACGCC TGAAGCGAAAAAACTATTAGAAGAATCTAAAAAAAGCGTTAAGGCTTATTTGGATTGCGTATCAAAAGCCAAAAACGAAG CTGAAAGAAAAGAGTGTGAGAAATTGCTCACGCCTGAAGCGAGAAAACTTTTAGAAGAAGCTAAAGAGAGCGTTAAGGCT TACAAGGACTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAGAAA ACTTTTAGAAGAATCTAAAAAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAAACGAAGCTGAAAGAAAAG AATGCGAGAAATTGCTCACCCCTGAAGCGAGGAAACTATTAGAAGAAGCTAAAGAGAGTGTTAAGGCTTACAAGGACTGC GTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTACTCACGCCTGAAGCGAAAAAAAAGTTAGAACA ACAGGTTCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTAC AGAAAAAGGTTTTAGCCAAAGAGAGTGTTAGGGTTTATTTGGATTGCGTATCAAAAGCCAAAAACGAAGCTGAAAGAAAA GAATGCGAGAAGTTACTCACGCCTGAAGCGAGAAAACTTTTAGAAGAAGCTAAAGAGAGTGTTAAGGCTTACAAGGACTG CGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAGAAAACTATTAGAGC AAGAAGTTAAAAAGAGCGTTAAGGCTTACAAAGACTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAG AAATTACTCACGCCTGAAGCTAGGAAACTTTTAGAGAATCAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGA GAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTACAGAAAAAGGTTTTAGCCAAAGAGAGTGTTAGGGTTTATTTGG ATTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGTGAGAAATTACTCACCCCCGAAGCGAGAAAACTATTA GAAGAAGCCAAAGAGAGTGTTAGGGTTTATTTGGATTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGTGA GAAATTACTCACCCCCGAAGCGAGAAAACTATTAGAAGAAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTC AAGCCAAAACTGAAGCTGAGAAACAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAGGAAACTTTTAGAAGAATCTAAA AAAAGCGTTAAGGCTTATTTGGATTGCGTATCAAAAGCCAAAAACGAAGCTGAAAGAAAAGAATGTGAGAAATTACTCAC TCCCGAAGCGAGAAAACTATTAGAAGAAGCTAAAGAGAGTGTTAAAGCCTATAAAGACTGCCTCTCTCAAGCTAGAAATG AAACTGAAAGGAGAGCCTGCGAGAAATTACTCACCCCTGAAGCGAGGAAACTCTTAGAGCAAGAAGTTAAAAAAAGCGTT AAGGCTTATTTAGACTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAACAAGAATGCGAGAAATACCTCACGCCCGAAGC TAGGAAATTTTTAGAGAAACAGCGCCAACAAAAAGATAAAGCGATAAAGGATTGCTTGAAAAACGCCGATCCTAACGACA GAGCGGCTATCATGAAGTGTTTGGATGGTTTGAGCGATGAAGAGAAGCTCAAATACCTGCAAGAAGCCAGAGAAAAGGCT GTCTTGGATTGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAGGAAATGCCAAAACCTTTATAGCGATTTGATCCAAGA AATCCAAAATAAAAAGGCACAGAACAAACAAAATCAATTGAGTAAAACAGAAAGGTTGCATCAAGCAAGCGAGTGCTTGG ATAACTTAGATGACCCTACTGATCAAGAAGCCATAGAGCAATGTTTAGAGGGCTTGAGCGATAGCGAAAGGGCGCTAATT CTAGGAATCAAACGACAAGCTGATGAAGTGGATCGGATTTATAGCGATCTAAGAAGCCGCAAAACCTTTGATAACATGGC GGCTAAAGGTTATCCATTGTTACCAATGGATTTCAAAAATGGTGGCGATATTGCTACTATTAATGCCACTAATGTTGATG CGGACAAAATAGCTAGCGATAATCCTATTTATGCTTCCATAGAGCCTGATATTACTAAGCAATACGAAACAGAGAAAACC ATTAAGGATAAGAGTTTAGAAGCTAAATTAGCTAAGGCTTTAGGTGGCGATAAGAAAGATGACGATAAAGAAAAAAGTAA AAAACCCACAGCAGAAACTAAAGCAGAAAGCAATAAGATAGACAAAGATGTCGCAGAAACTGCCAAAAATATCAGCGAAA TCGCTCTTAAGAACAAAAAAGAAAATAATGGGGGATTTGTAGATGAAAATGGTAATCCCGTTGATGATAAAAAGAAAGAA GAAAAACAAGATGAAACAAGCCCTGTCAAACAGGCCTTTATAGGCAAGAGTGATCCCACATTTGTTTTAGCGCAATACAC TCCCATTGAAATCACTCTGACTTCTAAAGTAGATGCCACTCTCACGGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTAT GGAACATGAACGGCACTATGATCTTATTAGACAAAGGCACTAAGGTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACG CCTATTATGACTCGTTTAATGATAGTCTTTACTAAAGCCATTACGCCTGATGGGGTGATTATACCTCTAGCAAACGCTCA AGCAGCAGGCATGTTGGGTGAAGCAGGGGTAGATGGCTATGTGAATAATCACTTCATGAAGCGCATAGGCTTTGCTGTGA TAGCAAGCGTGGTTAATAGCTTCTTGCAAACCGCGCCTATCATAGCCCTAGATAAACTCATAGGCCTTGGCAAAGGCAGA AGTGAAAGGACACCTGAATTTAATTACGCTTTGGGTCAAGCTATCAATGGCAGTATGCAAAGTTCAGCTCAGATGTCTAA TCAAATTCTAGGGCAACTGATGAATATCCCCCCAAGTTTTTACAAAAATGAGGGCGATAGCATTAAGATTCTCACCATGG ACGATATTGATTTTAGCGGCGTGTATGATGTTAAAATTACCAACAAATCTGTGGTAGATGAAATTATCAAACAAAGCACC AAAACTTTGTCTAGAGAACATGAAGAAATCACCACAAGCCCCAAAGGTGGCAATTGA Protein sequence : MNEENDKLETSKKAQQDSPQDLSNEEATEANHFEDLLKEESSDNHLDNPTETKTHFDEDKLEETQTQMDSGGNETSESSN GSLADKLFKKARKLVDDKRPFTQQKSLDEEAQKLNEEDDQENNEHQEETQTDLIDGETSEKAQQDSPQDLSNEEATEANH FEDLLKEESSDNHLDNPTESSDNHLDNSAETKTQETKTHFDEDKLEEITDDSNDQEIIKGSKKKYIIGGIVVAVLIVIIL FSRSIFHYFVPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKN AKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEE RNECLKNIPQDLQKELLADMSVKAYKDCVSRARNEKEKKECEKLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKD LQSDILAKESLKAYKDCASQAKTEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKK LEEAKKSIRVYLDCVSKAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKKLEE AKKSIRVYLDCVSKAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKKLEEAKK SIRVYLDCVSQAKTEAEKQECEKLLTPEAKKLLEESKKSVKAYLDCVSKAKNEAERKECEKLLTPEARKLLEEAKESVKA YKDCVSRARNEKEKKECEKLLTPEARKLLEESKKSVKAYLDCVSQAKNEAERKECEKLLTPEARKLLEEAKESVKAYKDC VSRARNEKEKKECEKLLTPEAKKKLEQQVLDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSKAKNEAERK ECEKLLTPEARKLLEEAKESVKAYKDCVSRARNEKEKKECEKLLTPEARKLLEQEVKKSVKAYKDCVSRARNEKEKKECE KLLTPEARKLLENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSRARNEKEKKECEKLLTPEARKLL EEAKESVRVYLDCVSRARNEKEKKECEKLLTPEARKLLEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEARKLLEESK KSVKAYLDCVSKAKNEAERKECEKLLTPEARKLLEEAKESVKAYKDCLSQARNETERRACEKLLTPEARKLLEQEVKKSV KAYLDCVSRARNEKEKQECEKYLTPEARKFLEKQRQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKA VLDCLKTARTDEEKRKCQNLYSDLIQEIQNKKAQNKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALI LGIKRQADEVDRIYSDLRSRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKT IKDKSLEAKLAKALGGDKKDDDKEKSKKPTAETKAESNKIDKDVAETAKNISEIALKNKKENNGGFVDENGNPVDDKKKE EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGT PIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGR SERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQST KTLSREHEEITTSPKGGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0527 | BAD13888.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 81 |
| orf13/14 | NP_223194.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 78 |
| HP0527 | BAD13860.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 76 |
| cagY | YP_005775730.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 76 |
| HP0527 | BAD13943.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 76 |
| cagY | AGC69787.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 75 |
| HP0527 | BAD13970.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 73 |
