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Name : HPGAM_02660 (HPGAM_02660) Accession : YP_005780255.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Virulence Product : cag island protein Function : - COG functional category : - COG ID : - EC number : - Position : 530021 - 530680 bp Length : 660 bp Strand : + Note : COG0551 Zn-finger domain associated with topoisomerase type I DNA sequence : ATGAGTCTAGCTACGAGTTACAATGTGAGTAATAATTTTTCTAAGTTTAATATTAAGAGAGTCAGAGGATATTTGATTTG TCTTGTTTGTAACACACCTAAAATGATACAAAGAGAATTGAATGGTATCTCATTTTATGGTTGCTCTGATTATGTAAATA AAGGCGACTGTAAGGGCGTTTTACGAGAAATAAATGGCTCAATGAAAGTGGTCTGCTTGCATTGTGAAAACACGCCCATA ATGGAAAAGGTAGAAAGTGGTAGGGGAGGAGCTTACGCTTGTAAGAATTGCAATAGGAAGTTTTACTTTATCGATCTTGC AAAACAAAACGAACGAAAAAAAGATTTAGAAAAAGAAAAAAAAGAATTGCTTAATAAGACTGAAAAGCAAAAAATCAAAC GCCTTGAGCGTTTCATTTTGGCTGGTGTAAAAGCTAATATTAAAGAAAATTCTTTTTTCTTAGGATGTAAAAATTATCCT AAGTGCGAATGGACTGCTAGTATGGATTCACAAGATCTTAAATGTCTCAAATGCAACAGATTAATGAAAAGAAAAAAGAA TTTCAAAAACAATGAGTTTTTTACAGCTACATCGCTTACCTTAAATGCAATGGAATTTTGTCTCTATATTAATCTGAAAA AAAAGGAAACCAATGTTTAG Protein sequence : MSLATSYNVSNNFSKFNIKRVRGYLICLVCNTPKMIQRELNGISFYGCSDYVNKGDCKGVLREINGSMKVVCLHCENTPI MEKVESGRGGAYACKNCNRKFYFIDLAKQNERKKDLEKEKKELLNKTEKQKIKRLERFILAGVKANIKENSFFLGCKNYP KCEWTASMDSQDLKCLKCNRLMKRKKNFKNNEFFTATSLTLNAMEFCLYINLKKKETNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf7 | NP_223188.1 | cag island protein | Virulence | cag PAI | Protein | 5e-77 | 97 |
