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Name : HPGAM_02615 (HPGAM_02615) Accession : YP_005780246.1 Strain : Helicobacter pylori Gambia94/24 Genome accession: NC_017371 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 520309 - 521754 bp Length : 1446 bp Strand : - Note : COG0174 Glutamine synthetase DNA sequence : ATGGTAGTAAGAACTCAAAATAGCGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCATATCGCTTATTCTTTTGGGGCTTTAACGCATGACATGTTTA AAGAGGGGATCCCTTTTGATGCGAGCTCTTTTAAAGGCTGGCAAGGCATTGAACATTCGGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGCGCGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAAAAATGCCCTAGAAGTATCGCCAAAAAAGCCCTAAAACATTTAAGAGATTTGGGCTTAGGCGATGTGG CTTATTTTGGCGCGGAGAATGAATTTTTTATCTTTGATTCCATTAAGATTAAAGACGCTTCCAATTCCCAATACTACGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAAAAGCTTTGAAAATGGCGTGAATTTTGGGCATAGACCGGGCAAGCA AGGGGGCTATATGCCTGTGCCGCCAACGGATACGATGATGGATATTCGCACAGAAATCGTGAAAGTCTTAAACCAAGTGG GGCTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCACAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGGAAAACGGCCACTTTCATGCC AAAACCCCTATATGGGGATAACGGGAGTGGGATGCACACCCATGTGAGCGTTTGGAAGAATAACGAAAACCTTTTTAGCG GCGAAACTTACAAAGGCTTGAGTGAGTTTGCCTTGCATTTTTTAGGGGGCGTGTTGCGCCATGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACTAACTCTTATAAACGCCTAATTCCTGGATATGAAGCCCCATCCATTTTAACCTATTCGGCTAA TAACAGGAGCGCGAGCGTGCGTATCCCTTATGGGATTTCTAAAAACAGCGCAAGGTTTGAATTCAGGTTTCCTGACAGCT CATCAAACCCCTACTTGGCTTTTGGGGCTATTTTAATGGCTGGCATTGATGGCGTTAAAAATAAAATGGATCCCGGCGAA GCAATGGACATTAACCTTTTCAAATTGACTTTAGATGAAATCCGAGAAAAAGGCATCAAACAAATGCCCCACACTTTAAG GAGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAAGGTCAGGTCTTTAGCGAAGAATTTATCCAGGCCT ATCAGTTTCTTAAATTCCATTCTGAAGTGTTCCCATGGGAGAGCAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHDMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSAVVFCDVYDVYKNQPYEKCPRSIAKKALKHLRDLGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSEFALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFGAILMAGIDGVKNKMDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGQVFSEEFIQAYQFLKFHSEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPGAM_02615 | YP_005780246.1 | glutamine synthetase | VFG1399 | Protein | 4e-88 | 45 |
