Gene Information

Name : HPGAM_05185 (HPGAM_05185)
Accession : YP_005780723.1
Strain : Helicobacter pylori Gambia94/24
Genome accession: NC_017371
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1048593 - 1049771 bp
Length : 1179 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGAAACAAGACTTTTAAAATTGAGAGCGTTGAGCTTAGCATGTTTAATGGGATTAGGCGTGAGCGGGTGCGCGTT
TTTAGACAAGCAAATCTTAAACGATCACTTGACTAAAGCTAAAAATAACCCAAAATACGATTGCCAAAAAGAAATGGGGT
CTTTCCCTAAAAAATACAATGGAATAGAGCAATGCTTAAAGGCTCAAGAAGAACTTATTGAACCAATCATCACTAAAAAG
ATTGATCAGTATCAATGCGGTGATTTCACTAATGAAGGCTTAAAAAATAAGTGCTTTAAAAGAAACGATGCCTACTTAAA
CACTCTTTTAACGCCCATCATTCAAAAACAAGAGCGTCGTTTTAGCTGCTCTGATTTCCATAACCCAGAGCTGCAAGAAC
AATGCAAAGACAAAACTAACGCTTATGAAAAACAACAATACCAACAAAAAAGGCTGATCAATCTCGCGCAATTAGAAGCG
TTTGAAAAAGAATACGCACAATATCAATCATACATTATCCCTTACTTCACCAAAGAATGCGTTAAAAATTCGCCCCATTT
AGCCAACAAGGAAAGACTATGCCAAAAAGAAGCGCATGAAAAATTTGATGACCCTTATTCTAGCTCTAAAGAATTGAGCG
TTCAATCGGCTATTTCTTTTTGCATTAAAAAAATTGATCCAAAATTAGAAAAAGCCGCTCTGATGAATGGCGTTGGTATA
AGCCCTTATAAAAAATCCACCCATTGCCAAAGAACGCAATTAGACAATAAGAGCTTGAAAGAAATCGCTTTGGATATGAA
CCCTAAATTAGAAAAGCAAAGCCCTTTTATTGATGCGGATAAAATGGCTATGCAATCTGCGGGGTTATTGAGAAAGAATA
AAGGTGTCTTGATCGCTTTTGCTACAGATATTTGCATGGAGCGTAACGAACACAAAAAAGAAGAGTTTATCAGCCTTAAA
GAGAGTTGCGCCCAATCGCAAGCCAAAGTTTATAACAACAAAGAGCGCTTTGAAAAATTCATACAAGATTACCAAAAAGA
CTTAAAAACTTGCCTTTTAGACACTTCTAACACTAAAGAAGAAATGGAGCAAAATGTTTCACAATGCCAAAAAGAGCAAT
TGAGAGACGATAACAAAGGCTTCACTTTAGAAGAGTTGGTTCAAAAATACGCTAAGTAA

Protein sequence :
MKETRLLKLRALSLACLMGLGVSGCAFLDKQILNDHLTKAKNNPKYDCQKEMGSFPKKYNGIEQCLKAQEELIEPIITKK
IDQYQCGDFTNEGLKNKCFKRNDAYLNTLLTPIIQKQERRFSCSDFHNPELQEQCKDKTNAYEKQQYQQKRLINLAQLEA
FEKEYAQYQSYIIPYFTKECVKNSPHLANKERLCQKEAHEKFDDPYSSSKELSVQSAISFCIKKIDPKLEKAALMNGVGI
SPYKKSTHCQRTQLDNKSLKEIALDMNPKLEKQSPFIDADKMAMQSAGLLRKNKGVLIAFATDICMERNEHKKEEFISLK
ESCAQSQAKVYNNKERFEKFIQDYQKDLKTCLLDTSNTKEEMEQNVSQCQKEQLRDDNKGFTLEELVQKYAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPP12_0450 YP_002301086.1 hypothetical protein Not tested cag PAI Protein 1e-160 93