Gene Information

Name : abc (HPF16_1490)
Accession : YP_005779725.1
Strain : Helicobacter pylori F16
Genome accession: NC_017368
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1565234 - 1566217 bp
Length : 984 bp
Strand : +
Note : -

DNA sequence :
ATGGTAGTAGAATTAAAAAACATTGAAAAGATTTATGAAAATGGGTTTCATGCTCTAAAAGGCGTGAATTTGGAATTAAA
AAAAGGCGATATTTTAGGCGTGATAGGCTATTCAGGGGCGGGGAAATCCACGCTCATTCGCCTAATCAATTGCTTGGAGC
GCCCCAGTTCTGGAGAAGTTTTAGTCAATGGGGTCAATCTGTTAAAATTAAAGCCTAAAGAATTGCAAAAAGCGCGCCAA
AAAATAGGCATGATTTTCCAGCATTTCAATTTATTGAGCGCTAAAAATGTGTTTGAAAATGTCGCTTTCGCTCTAGAAAT
CGCGCGATGGGAAAAAACCAAGATCCAATCAAGGGTGCATGAATTATTGGAATTAGTGGGGCTAGAAGATAAAATGCATT
TTTATCCTAAACAGCTCAGCGGTGGGCAAAAACAACGAGTGGCGATCGCTAGGAGTTTAGCGAATTGCCCTGATTTATTG
CTTTGCGATGAAGCCACATCCGCACTAGATTCTAAAACCACGCATTCTATTTTAACGCTTTTAAGCGGCATTCAAAAAAA
GCTTAATTTGAGCATCGTTTTCATCACGCACCAGATTGAAGTGGTTAAAGAATTGTGCAATCAAATGTGTGTGATCAGCA
GCGGCGAAATTGTAGAAAGAGGCTCGGTAGAAGAAATTTTTGCTAACCCTAAACATGCCGTTACTAAAGAATTGCTTGGC
ATCAAAAATGAGCATGGGGATCAAAAATGCCAAGACATTTATCGCATCGTGTTTTTAGGGGAGCATTTAGACGAGCCGAT
CATTTCTAATTTGATCAGGCGTTTTAAAATAGATGTGAGTATCATTTCAGGCAATATTGAAGAGCTTACGACTAAAGATA
TAGGGTATTTAGTGGTGCGGTTTTTAGGCAGCACTACAGAAACTCAAAGGGCTTTAGAGTATTTAAACGCTTTAGGCTTA
CAAGTGGAAAAAATAAAGGATTAA

Protein sequence :
MVVELKNIEKIYENGFHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSSGEVLVNGVNLLKLKPKELQKARQ
KIGMIFQHFNLLSAKNVFENVAFALEIARWEKTKIQSRVHELLELVGLEDKMHFYPKQLSGGQKQRVAIARSLANCPDLL
LCDEATSALDSKTTHSILTLLSGIQKKLNLSIVFITHQIEVVKELCNQMCVISSGEIVERGSVEEIFANPKHAVTKELLG
IKNEHGDQKCQDIYRIVFLGEHLDEPIISNLIRRFKIDVSIISGNIEELTTKDIGYLVVRFLGSTTETQRALEYLNALGL
QVEKIKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-56 41
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-56 41