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Name : serS (HPF16_1377) Accession : YP_005779612.1 Strain : Helicobacter pylori F16 Genome accession: NC_017368 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1442530 - 1443777 bp Length : 1248 bp Strand : - Note : - DNA sequence : ATGATTGATAAAAAACTTTTATTGCAAGATTTTGAGATGGTGGCTCTTTCTTTAAAAAAGCGTAATAATGCGATGGATGA TGAATTGGAGCGTTTGCGCGAAGTCATCACGCATTATAAAAAGCAACTCATTGAATTAGAAGGCTTGCAAGCCTTTCAAA ACAAGGTTTCTAAAGAATTTGGTATCAAAATGGCTCAAAAAGTGGATACAAGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTCCAAAAGCGTGGGCGAATTGGAACAACAAATAGATTTAAAGCTTTCAATAATCCCTAA TTTAGTGGATGAAAAAACCCCTTTAGGTGCAAGCGAAGAAGACAACATAGAAATTAAAAAAATCTTAACCCCTAGAAATT TCACTTTCAAACCTAAAGAGCATTTTGAACTCGCTCAACAAAATGGCTGGATTGATTTTGAAAGCGGCGTGAAACTCGCC AAAAGCCGTTTTTCTGTCATTAGGGGTTTTGGGGCTAAAATTTATCGTGCGCTCATTCATTTAATGTTGGATTTTAATGA AAAAAATGGCTTTGAAATCATCTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACCGGGCAATTGCCCAAAT TCAAAGAAGATGTTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCCACCGCTGAAGTAACGCTCACCAATCTATAC AACGACACGATTGTTAGCGTTGAAAAACTCCCTATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGCGAAGCAGGGAG TGCGGGCAAGGACACAAGGGGGATGATAAGACAGCACCAGTTTGATAAGGTAGAACTAGTGGCTATCGTGCACCCTAAAG AAAGCGATGCCATGCAAGAGCATATGCTAGAGAGCGCTAGCGAAATTTTAAAGGCTTTGGAATTGCCGCACCGGTTTGTG CAATTGTGCAGCGGGGATTTAGGCTTTAGCGCGAGCAACACGATAGATATTGAAGTGTGGCTTCCCGGGCAAAATTGCTA CAGAGAAATCAGCTCCGTGTCTAATACGAGGGATTTTCAAGCCAGGCGTGCGAAAATCCGCTTCAAAGAAAATCAAAAAA ACCAATTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATCCATATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELEGLQAFQNKVSKEFGIKMAQKVDTSDLKKELENN KIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAIVHPKESDAMQEHMLESASEILKALELPHRFV QLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-77 | 46 |
