|
Name : metB (HPF16_0119) Accession : YP_005778354.1 Strain : Helicobacter pylori F16 Genome accession: NC_017368 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase Function : - COG functional category : - COG ID : - EC number : - Position : 123184 - 124326 bp Length : 1143 bp Strand : - Note : - DNA sequence : ATGCGCATGCAAACAAAATTAATCCATGGGGGTATTAGTGAAGACACGACAACGGGGGCGGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCGCCATAAGGGCTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTG CTTTAGAAGAACTCATCGCCGATTTAGAAGGGGGGGTTAAGGGGTTTGCTTTTGCCTCTGGACTAGCTGGGATCCACGCC GTTTTTTCCCTCTTGCAATCAGACGATCATGTGCTATTGGGCGATGATGTCTATGGGGGGACTTTTCGCTTGTTCAATAA AGTGCTTGTCAAAAACGGGCTTTCTTGCACCATTATAGACACTAGCGATATATCCCAAATCAAAAAGGCTATCAAGCCCA ACACCAAAGCCCTTTATTTGGAAACTCCTAGTAACCCCTTGCTTAAAATCACGGATTTAGCGCAATGCGCTAGTGTTGCT AAAGATCATGGTTTGCTCACTATCGTGGATAACACCTTTGCCACCCCCTATTGCCAAAACCCGCTTCTTTTGGGGGCGGA CATTGTGGCGCATAGCGGCACCAAATACTTGGGCGGTCATAGCGATGTAGTTGCTGGGCTTGTAACCACCAATAATGAAG CGCTAGCCCAAGAGATCGCTTTTTTCCAAAACGCTATCGGTGGGGTTTTAGGCCCTCAAGACAGCTGGCTGTTGCAAAGA GGGATTAAAACGCTAGGATTACGCATGGAAGCCCATCAAAAAAATGCCCTTTGCGTGGCTGAGTTTTTAGAAAAACACCC TAAAGTAGAAAAGGTTTATTACCCGGGTCTTCCCACTCACCCTAACCACGAACTGGCCAAAAAACAGATGCGCGGCTTTA GCGGGATGCTCTCTTTCACTCTCAAAAACGACAGCGAAGCGGTCGCTTTTGTAGAAAGCCTTAAACTATTCATTTTAGGC GAGAGTTTGGGTGGGGTGGAAAGTTTGGTGGGAATTCCAGCGCTTATGACCCATGCGTGTATCCCCAAAGCGCAACGAGA AGCTGCCGGGATTAGAGATGGTTTGGTGCGCTTGTCTGTGGGGATTGAGCATGAACAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCGCTAAAATAGGCTAA Protein sequence : MRMQTKLIHGGISEDTTTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSDDHVLLGDDVYGGTFRLFNKVLVKNGLSCTIIDTSDISQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVA KDHGLLTIVDNTFATPYCQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILG ESLGGVESLVGIPALMTHACIPKAQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 4e-97 | 55 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 3e-98 | 55 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 1e-72 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| metB | YP_005778354.1 | cystathionine gamma-synthase | BAC0207 | Protein | 3e-61 | 43 |
