Gene Information

Name : cagI (HPF57_0567)
Accession : YP_005777281.1
Strain : Helicobacter pylori F57
Genome accession: NC_017367
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 586845 - 587990 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence :
GTGAAATGTTTTTTAAGCATATTTTCTTTCTTAACTTTTTGTGGCTTGTTTCTGAATGGTGCAGGGGCAGTAATAACGCT
TGAATCTGCCTTAAAAGCCATTCAGGCGGATGCACAAGCCAAACAAAAAACCGCTCAAGCCGAATTAAAAGCCATAGAGG
CTCAATCTAGTGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGACAATTGAGAACTCAGCTTGCAACTATAAGCGCT
ATGTTAAAAGGGGCTAATGGCGTTATTAATGGTGTCAATAGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCT
TGGCATCATGGAAGGGTATTCAAGCGCGCTTAGCGCATTGGGAGGAAATGTCAACATGATCGTGGAAAAACAAAAAATTA
ATACCCAAACAGAAATCCAAAACATGCAAATTGCGCTCCAAAAAAATAACGAAATAATCAAGCTCAAAATGAACCAACAA
AACGCTCTCTTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACCCTAAAAACACAAATGGAAATGCTTTCTCAAGC
TCTAGGAAGTTCTTCTGACAACGCTCAATACATCGCTTACAATACGATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAG
GTTTTGAAACATGGTTGAAAGTGGCTATGCAAAAAGCGACCCTTATTGACTACAATTCCCTAACAGGTCAGGCTTTGTTT
CAAAGCACCATCTACGAGCCTGCTCTTAGTTTTTTTTCAAGCATGGGTGCACCATTTGGAATCATTGAAACATTTACTCT
AGCACCCACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAA
AGATTGTAGCCCTTATTCAAAATAAACTAAATGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGAAGAA
ATCAAAACCTTAAAAGGATCAGTAGATTTGAATGCGCTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTA
TATAGAGAATCTTGAAAAAAAAGCCGATCTTTGGGAAGAACAACTGAAATTAGAGAGAGAAACGACAGCAAGAAACATTG
CTAGCTCTAAAGTTATTGTCAAATGA

Protein sequence :
MKCFLSIFSFLTFCGLFLNGAGAVITLESALKAIQADAQAKQKTAQAELKAIEAQSSAKEKAIQAQIEGQLRTQLATISA
MLKGANGVINGVNSMTGGFFAGSDILLGIMEGYSSALSALGGNVNMIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQ
NALLEALKNSFEPSVTLKTQMEMLSQALGSSSDNAQYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQALF
QSTIYEPALSFFSSMGAPFGIIETFTLAPTKCPYLDGLKISACLMEQVIQNYRKIVALIQNKLNDADFQNIAYLNGINEE
IKTLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIASSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-161 100
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-154 99
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-159 99
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-159 99
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-159 99
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-159 99
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-160 99
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-160 99
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-160 99
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 2e-156 97
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-157 97
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-156 97
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 4e-156 97
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 5e-157 97
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 7e-156 97
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-156 97
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-156 97
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-154 96
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 3e-155 96
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 9e-156 96
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 2e-155 96
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 2e-155 96
cagI AAF80208.1 CagI Virulence cag PAI Protein 1e-155 96
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-151 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cagI YP_005777281.1 cag pathogenicity island protein VFG0299 Protein 2e-156 97