Gene Information

Name : hslU (HPF57_0546)
Accession : YP_005777260.1
Strain : Helicobacter pylori F57
Genome accession: NC_017367
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 558058 - 559389 bp
Length : 1332 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGAATTGAATATGACCCCAAGAGAAATTGTCGCTTATTTGGATGAATACATCATTGGGCAAAAGGAAGCTAAAAA
GTCTATCGCTATCGCTTTTAGGAATCGTTACAGGCGTTTGCAACTGGAAAAATCCTTACAAGAAGAAATCACGCCTAAAA
ACATTTTAATGATTGGATCTACTGGCGTGGGTAAAACGGAAATCGCCAGAAGAATAGCAAAAATCATGAAACTCCCCTTT
GTGAAAGTGGAAGCGAGCAAATACACAGAAGTGGGTTTTGTGGGGCGCGATGTGGAGTCTATGGTAAGGGATTTAGTCAA
TAACAGCGTGCTTTTAGTGGAAAATGAGCATAAAGAAAAACTAAAAGACAAGATTGAAGAAGCGGTTATAGAAAAAATTG
CTAAAAAACTCCTACCACCCTTGCCTAATGGGGTGAGCGAAGAAAAAAAACAAGAATACGCTAACAGCCTTTTAAAAATG
CAACAAAGAATCGCACAAGGCGAGTTGGATAGCCGAGAAATTGAAATTGAAGTGCGTAAAAAAAGCATAGAAATTGATTC
TAATGTGCCGCCTGAAATTTTAAGGGTTCAAGAAAACTTGATTAAGGTTTTCCATAAAGAACATGATAAAGTCAAAAAAA
CTTTAAGCGTTAAAGAGGCCAAAGAAGCCCTAAAGGCAGAAATTAGCGACACGCTTTTAGACAGCGAAACTATTAAAATG
GAAGGCTTGAAGCGCGCGGAAAGTTCAGGGGTGATTTTTATTGATGAAATTGATAAGATCGCTGTAAGCTCTAAAGAAGG
AGGCCGTCAAGATCCCAGTAAAGAGGGGGTTCAAAGGGATTTGTTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGT
ATGGTTCTATTAAAACAGAGCATATTTTATTCATTGCAGCAGGGGCTTTTCATCTTGCTAAACCAAGCGATCTCATCCCT
GAATTGCAAGGCCGTTTCCCTTTAAGGGTGGAGCTAGAGAGTTTAACCGAAGAAATCATGTATATGATTTTAACCCAAAC
TAAAACCTCTATCATCAAGCAATACCAAGCCCTTTTAAAAGTGGAAGGCGTAGAAATTGCGTTTGAAGACAATGCGATCA
AAGAGTTAGCCAAACTCTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGCGCTAGAAGGTTGCACACCACCATTGAA
AAAGTGCTAGAAGACATTAGCTTTGAAGCGGAGGATTATTCTGGGCAAAATGTTACTATCACTAAAGAGTTGGTTCAATC
AAAGCTAGAGGATTTAGTGGCTGATGAGAATTTAGTGAAGTATATTTTATAA

Protein sequence :
MSELNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIMKLPF
VKVEASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVIEKIAKKLLPPLPNGVSEEKKQEYANSLLKM
QQRIAQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENLIKVFHKEHDKVKKTLSVKEAKEALKAEISDTLLDSETIKM
EGLKRAESSGVIFIDEIDKIAVSSKEGGRQDPSKEGVQRDLLPIVEGSVVNTKYGSIKTEHILFIAAGAFHLAKPSDLIP
ELQGRFPLRVELESLTEEIMYMILTQTKTSIIKQYQALLKVEGVEIAFEDNAIKELAKLSYNANQKSEDIGARRLHTTIE
KVLEDISFEAEDYSGQNVTITKELVQSKLEDLVADENLVKYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 0.0 98