Gene Information

Name : HPF57_0147 (HPF57_0147)
Accession : YP_005776861.1
Strain : Helicobacter pylori F57
Genome accession: NC_017367
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 152699 - 153559 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence :
ATGATGCAAGGCTTGTTTTTGTTCTTTGAATATTTTGATAATAGGATTAAGCTCAAATCCTTGCACAATCTAGCAGAAGA
ACAGGTTATAGACTTCTTATTTGGATTAGCCAAAAACAGGAAGCCAAGCTCTATGGCTAAATATGTGATGTGTTTAAGAC
AATTCTTTGATTATTTAGACAGAAAAAGAAACTATAGCTTTGAATTTGAACTTAAAAATCTATCGTTCACCAAGAAAGAA
ACGCATTTGCCTAAACACTTGAATAAAAATGATTTTAAGGCTTTTATCCAAGCTCTTCTAAAATACCATCCCAAAACCAG
TTTTGAAAAATGCAATCAGTGTATTTTACTGCTTATTGCATTAGGGGGGTTAAGGAAGTTTGAAGCCTTAGATTTGGAGC
TAAAAAACATTGCTTTAGAAAATAACCACTACCGCCTTTTAATCAAAGGCAAAAACAACAAAGAGAGATACGCTTATATT
GAAAAAGAGTTTTTGCAAGTTCCTTTGAATGCGTGGCTAAGCGATACCAAACGATTAAAGAGTTTTAAGGGGCGTTTTGT
GTTTAAGAAAGCAAAAAACAACACCACACAAAAAACTTGCTCTTTAAAGGGCTTTATCGTTAAAATTTTTAAGCTTTCTA
ATATTGATGTAAAATCTTATGGATTAGGTTTGCATCTTTTTAGGCATAGTTTTGCCACTTTTATTTATGATGAAGCACAG
GATTTGGTTTTAACTTCAAGAGCGTTAGGGCATAGTTCTTTGCTTTCTACTAAAATCTATATCCATACCACTCAAGAACA
CAATAAAAAAGTGGCTCTTGTGTTAGGGGGGGGGTTATTAAGAAATGAAAAAAGCGAGTAG

Protein sequence :
MMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMCLRQFFDYLDRKRNYSFEFELKNLSFTKKE
THLPKHLNKNDFKAFIQALLKYHPKTSFEKCNQCILLLIALGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYI
EKEFLQVPLNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIVKIFKLSNIDVKSYGLGLHLFRHSFATFIYDEAQ
DLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGGLLRNEKSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPP12_0437 YP_002301073.1 integrase/recombinase XercD family Not tested cag PAI Protein 2e-115 97