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Name : serS (HPF57_1395) Accession : YP_005778109.1 Strain : Helicobacter pylori F57 Genome accession: NC_017367 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1475456 - 1476703 bp Length : 1248 bp Strand : - Note : - DNA sequence : ATGATTGACAGAAAACTTTTATTGCAAGATTTTGAGATGGTGGCTCTTTCTTTAAAAAAGCGTAATAATGCGATGGATGA TGAATTGGAGCGCTTGCGCGAAGTCATCACGCATTATAAAAAGCAACTCATTGAATTAGAAAGCTTGCAAGCCTTTCAAA ACAGGGTTTCTAAAGAATTTGGTATCAAAATGGCTCAAAAAGTGGATACAGGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTCCAAAAGTGTGGGCGAATTGGAACAACAAATAGATTTAAAGCTTTCAATAATCCCTAA TCTGGTGGATGAAAAAACCCCTTTAGGCGCAAGCGAAGAAGACAATATAGAAATTAAAAAAATCTTAACCCCTAGAAATT TCACTTTCAAGCCCAAAGAGCATTTTGAACTCGCTCAACAAAATGGCTGGATTGATTTTGAAAGCGGCGTGAAACTCGCC AAAAGCCGTTTTTCTGTCATCAGGGGTTTTGGGGCTAAAATTTATCGCGCGCTCATTCATTTAATGTTGGATTTTAATGA AAAAAATGGCTTTGAAATCATCTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACTGGGCAATTGCCCAAAT TCAAAGAAGATGTTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCCACCGCTGAAGTAACGCTCACTAATCTATAC AACGACACGATTGTTAGCGTTGAAAAACTCCCTATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGTGAAGCAGGGAG TGCGGGCAAGGACACAAGGGGGATGATAAGACAGCACCAGTTTGATAAAGTAGAGCTAGTGGCTATCACGCACCCTAAAG AAAGCGATGTTATGCAAGAGCATATGCTAGAGAGCGCTAGCGAAATTTTAAAGGCTTTGGAATTGCCGCACCGGTTTGTG CAATTGTGCAGCGCGGATTTAGGCTTTAGCGCAAGCAACACGATAGATATTGAAGTGTGGCTTCCTGGGCAAAATTGCTA CAGAGAAATCAGCTCCGTGTCTAATACGAGAGATTTTCAAGCCAGGCGCGCGAAAATCCGCTTCAAAGAAAATCAAAAAA ACCAATTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATCCATATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDRKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNRVSKEFGIKMAQKVDTGDLKKELENN KIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDVMQEHMLESASEILKALELPHRFV QLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-77 | 45 |
