Gene Information

Name : rplS (HPF57_1109)
Accession : YP_005777823.1
Strain : Helicobacter pylori F57
Genome accession: NC_017367
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1179614 - 1179970 bp
Length : 357 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAACCGCTACATTCAGCAGTTTGAAGACGCTCAATTAAAAGACAAAACCATGCCAGTATTTAAAGCCGGCGATAC
TTTGAGACTTGGTATCACCATTAAAGAAGGCGAAAAAACACGAACTCAGTATTTTGAAGGCGTGTGTATTGCGATTAGAG
GCAATGGCGTGGATAAGACTTTTTGCGTGCGTAAAATAGGGGCTAACAATATCGGCGTGGAGAAAATTTTCCCTTTCTAT
AGCGAAAGTTTGGCGAGCGTTGAGGTGTTGCGTGTGGGTAGGGTGTGCCGTGCGAAGCTCTACTATTTGCGCGATAGGAG
AGGTAAGGCAGCAAGGATTAAAGAAATCCGCCATTAA

Protein sequence :
MKNRYIQQFEDAQLKDKTMPVFKAGDTLRLGITIKEGEKTRTQYFEGVCIAIRGNGVDKTFCVRKIGANNIGVEKIFPFY
SESLASVEVLRVGRVCRAKLYYLRDRRGKAARIKEIRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 3e-23 52
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 3e-20 50