Gene Information

Name : HPF57_0104 (HPF57_0104)
Accession : YP_005776818.1
Strain : Helicobacter pylori F57
Genome accession: NC_017367
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 104997 - 106520 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence :
ATGGCTTATATCGCTAATTTACAATTCTTACCATTAGATGAGATTTTACTTTCTAATGGTTATAAACACAAAGTAGAGAA
ATCAAGCAAAAATAACCCGGCTCTTTACAATGAGTACGATACCATTAAAGGCACACTTATTGTTTCAAGAAAGCCTGATG
GGAGTTATCATTATTTCAACACTCATAATGATGAAGATAAAGGCACGATTATCGCCTTTTGTAAAAATCGTGGGCTAGAT
TTTAATGATTTGATCAAAAATAGAGATGATTTAGAAATTAGCGATAAGCCAAACCACAAATATAACAATTCCAAGCCTTA
TACAATCATTACCAAAGAACAGGAAGCAGAGCGTCAAAAAGTAGTGAAACAATTTGAAAAGCTCTCTACCTACGATCTAG
AAAGCTCAGATTTGTTTCACACTTTATTGGATAGTCGCTCTTTGGATAAAACTTTACTAAAACCTTACAATCATTTACTC
AAAGAAGATGAACATGCAAATTTATGCGTGCCTTGCTATTTAACCAATGATAATGGAAACTTAATACAGGGTGGGTATAA
CAAGCGGTTATCCAAACCTTTCACTATGCAAGGCGCTACTAATCCCACTAAACACTTAATGCAAGCAGGTTCTATCAAGG
GTTTTGAAGTTTTATCTCCACAGAATATTAAAAATATTCAAAATATCATTGTAGCTGAAAGCGTTTTTGATGGCTTAAGC
GTGTTAGAAATGCAAGGGTTTGATCCCAATCAAACAGCTATTATTTCTACTATTGGTAATTTCACAGAAGAAAGAATGCA
AAAATTTGTAGATAAATTTCTTAATACCATCAACACTTATAAGTGTAAGGAATACAATGAATACCACAAAGAAATTGATC
GCTACAACAAGCAATTAGAGGACTATGAAAATTACACAAATTTTCAAAAAAGATATGAAAAATGGCGTGCTAAAGAGTTA
GCTAAACACGATAATGACCCTAAAAAAGTCCCTAATGATCCCATTTTCTCGCCCATAAGAGATAAAAATAATCTTATCCC
TAGATCCGTTTTTAAGCCTGCTCCACCCTTACGCCTAAAAGAACCAAAAATTCCTAATTTAAGTCTTAATGTTATTTTAG
CAATGGATAATGATGAACAGGGGCGAAAATTCAACGCTATTTTGGAAAAAATTTTTTACGCTCACACTAAAGAAATTCCA
AACATCTATACGCCTATCAGCAAAGATGCGAACGATGATTTGAAAATCGCTAAAGCATTAGGATTGAAGCAAATTAGCAA
TAGGATTTTACAAGATTTTTTGTTTGATGCCAAAGAAAAAATGCAAAACCCTACTACCACACCATCACAAAAAAGCATCT
TGGCTAACCAATTACAAAAACTACAAGATCTAATGCCAAAATCTAAACTACTACAAGGAGTGTTTTATGGTTACCAACAA
GATCATGGCTTTGGATCTAAATATGTAGCTAATTCTGTCTATTACACCAACAATCAATCTCAAAACAAAGGACATGAAAG
ATGA

Protein sequence :
MAYIANLQFLPLDEILLSNGYKHKVEKSSKNNPALYNEYDTIKGTLIVSRKPDGSYHYFNTHNDEDKGTIIAFCKNRGLD
FNDLIKNRDDLEISDKPNHKYNNSKPYTIITKEQEAERQKVVKQFEKLSTYDLESSDLFHTLLDSRSLDKTLLKPYNHLL
KEDEHANLCVPCYLTNDNGNLIQGGYNKRLSKPFTMQGATNPTKHLMQAGSIKGFEVLSPQNIKNIQNIIVAESVFDGLS
VLEMQGFDPNQTAIISTIGNFTEERMQKFVDKFLNTINTYKCKEYNEYHKEIDRYNKQLEDYENYTNFQKRYEKWRAKEL
AKHDNDPKKVPNDPIFSPIRDKNNLIPRSVFKPAPPLRLKEPKIPNLSLNVILAMDNDEQGRKFNAILEKIFYAHTKEIP
NIYTPISKDANDDLKIAKALGLKQISNRILQDFLFDAKEKMQNPTTTPSQKSILANQLQKLQDLMPKSKLLQGVFYGYQQ
DHGFGSKYVANSVYYTNNQSQNKGHER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPP12_0471 YP_002301105.1 hypothetical protein Not tested cag PAI Protein 3e-177 97