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Name : serS (HPF32_1367) Accession : YP_005776591.1 Strain : Helicobacter pylori F32 Genome accession: NC_017366 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1443942 - 1445189 bp Length : 1248 bp Strand : - Note : - DNA sequence : ATGATTGATAAAAAACTTTTATTGCAAGATTTTGAGATGGTGGCTCTTTCTTTAAAAAAGCGTAATAATGCGATGGATGA TGAATTGGAGCGCTTGCGCGAAGTCATCACGCATTATAAAAAGCAACTCATTGAATTAGAAAGCTTGCAAGCCTTTCAAA ACAGGGTTTCTAAAGAATTTGGTATCAAAATGGCTCAAAAAGTGGATACAAGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTATAAAAGCGTGGGCGAATTGGAACAACAAATAGATTTAAGGCTTTCAACAATCCCTAA TCTGGTGGATGAAAAAACCCCTTTAGGCGCAAGCGAAGAAGACAACATAGAAATTAAAAAAATCTTAACCCCTAGAAATT TCACTTTCAAACCCAAAGAACATTTTGAACTCGCTCAACAAAATGGCTGGATTGATTTTGAAATCGGCGTGAAGCTCGCC AAAAGCCGTTTTTCTGTCATCAGGGGTTTTGGGGCTAAAATTTATCGTGCACTCATTCATTTAATGTTGGATTTTAATGA AAAAAATGGCTTTGAAATTATCTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACCGGGCAATTACCCAAAT TCAAAGAAGATGTTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCTACCGCTGAAGTAACGCTCACTAATCTATAC AACGACACGATTGTTAGCGTTGAAAAACTCCCTATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGTGAAGCAGGGAG TGCGGGCAAGGACACAAGGGGGATGATAAGACAGCACCAGTTTGATAAAGTAGAGCTAGTGGCTATCACGCACCCTAAAG AAAGCGATGTTATGCAAGAGCATATGCTAGAGAGCGCTAGCGAAATTTTAAAGGCTTTAGAATTACCGCACCGGTTTGTG CAATTGTGCAGTGGGGATTTAGGCTTTAGCGCGAGCAACACGATAGACATTGAAGTGTGGCTACCCGGGCAAAATTGCTA CCGAGAAATCAGCTCGGTGTCTAACACGAGGGATTTTCAAGCCAGGCGCGCGAAAATCCGCTTCAAAGAAAATCAAAAAA ACCAATTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATCCATATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNRVSKEFGIKMAQKVDTSDLKKELENN KIKLNELYKSVGELEQQIDLRLSTIPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFEIGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDVMQEHMLESASEILKALELPHRFV QLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-76 | 46 |
