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Name : tktA (HPF30_0937) Accession : YP_005774682.1 Strain : Helicobacter pylori F30 Genome accession: NC_017365 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 1006393 - 1008318 bp Length : 1926 bp Strand : + Note : - DNA sequence : ATGCAATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCCAACACGCTGCGCTTTTTGTGCGCGGACATGATAGA TAGGGCTAATAGCGGGCATCCGGGTGTGTGCTTGGGACTAGCCGATGTGATGGTGGTTTTAAGCTTGCACTTAAACCTAA ACCCCACCAACCCTAAATGGCTTAATAGGGACAGGCTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGCTTGGAAGATTTAAAGCATTTCAGGCAATTACACTCTAAAACCCCAGGACACCC CGAATTGCACCACACTGAAGGCATTGAGATCACGACCGGGCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGTCAATACGCTCAAAACCTTTTAGACAAAGAAGCCATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGCTATGAGAGCGCTTCTTTAGCCGGGCACCTCAACCTAAACAACCTCATTGTGATTTATGACAG CAACCAGATCAGCATTGAAGGCGCTATTAATATTAGTTTTAGCGAACAGGTCAAGATGCGGTTTGTGGCGCAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCGATTCATAACGCTTTAGAAGAAGCCAAAAAATCCACCAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGAGCTATTGGCTTAGAGGGGAGTGAAAAAACGCATGGCTCACCCCTAAA TAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAATCCTAATGAAAGCTTTATCATTAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGTTTAGAAGCCTTATGGGAAAAATCCTTAAGCCCTAAAGCAAAAGAA AAGATCCATGCGTTAAAGGATTTTGATTTTAGCGCCATTAATTACCCCGTTTTCAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGGGCTTTTTGGGGGGGAGCGCGGATTTAGCCCCAT CCAATAACACGCAATTAAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTGTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTACTT GATGCCTAGCATTCGTTTGAGCGCTTTAATGAAACTAAAAGCCCTTTTTATTTTTACGCATGACAGCATTGGCGTGGGCG AAGACGGGGCCACACACCAACCCATAGAACAATTGAGCCATTTGCGCGCTTTGCCCAATTTCTACGCTTTCAGACCCAGC GACGCTTTTGAAAATACCGCTTGCATGCAAATAGCGTTAAGTTTGAGCGCTCCTAGCGGGCTTATTTTATCGCGCCAGAA TTTACCCGTGCTTGATGAGGTTTCTAAAGAGCGGGTTTTAAAAGGCGCGTATGTTAAATATGATGCTAAAAACCCCGCTA TCACGCTAGTTGCGAGCGGGAGCGAAGTTTCTTTGGCTTTAGAGAGCGCTAAAATGTTAGAGCGAGAAAATATCCCCACT CAAGTGGTGAGCGCGCCATGCTTTGATTTATTGGTGGAACAAGATGAAAGCTATCTTAAAGAGCTTTTTAAGGGTAAAGT CTTAGTGATTGAAGCGAGCCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGTT CAGCAAAGGGCGATAAACTCTTTGAAAAATTCGGCTTCAGCGTTGAAAACATCACCACTCAAGCTAAAAGGTTACTCAAC GCATGA Protein sequence : MQLSNADLERLKSMANTLRFLCADMIDRANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKHFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLCGDGD LQEGISYESASLAGHLNLNNLIVIYDSNQISIEGAINISFSEQVKMRFVAQNWEVLECDGHDYQAIHNALEEAKKSTKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENAQINPNESFIISPKNKMHFEEVKVRGVSLEALWEKSLSPKAKE KIHALKDFDFSAINYPVFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTQLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFVPFCATFFVFSDYLMPSIRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQIALSLSAPSGLILSRQNLPVLDEVSKERVLKGAYVKYDAKNPAITLVASGSEVSLALESAKMLERENIPT QVVSAPCFDLLVEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITTQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-97 | 41 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-86 | 41 |
