Gene Information

Name : HPF30_0811 (HPF30_0811)
Accession : YP_005774556.1
Strain : Helicobacter pylori F30
Genome accession: NC_017365
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 873209 - 875290 bp
Length : 2082 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGCAGACGCAACCACACTATTAAAATTTATTAACGACAATCAAAAGAATCAATTGGTCATTCCCATCTATCAGAG
AGTGTATAGTTGGGAAAAGGAACAATGCAAGCAATTATGGGATGATATTATAAAAATTGGTGGAGATGATAAGATGGATG
GGCATTTTATCGGTTCTATTTTGTATGTGCTAGATAGGATTACGCACTCTAACAATGCATTACTCATCATTGATAGCCAA
CAAAGGCTCACCACTATCACGCTTTTACTCACCGCCTTGAGGGATCGTTTAAACGATGAAGATGAATTTTTAGAAAAATT
TTCGCACCAAAAAATCCAGAACGACTATCTTATCAACAGCGATAAGGACGGCGATAAGAAATTCAGACTCATTCTCTCAG
AGTCTGATAAAGATACCCTGCTATCTTTGATTGATAAAGACAGAAGAAAACCGAGCGAGCCTTCATCAAAAATAGTGGAA
AATTTTAAATTATTTGAAGAATGGATCCGTAAAAACACCAACCAACTAGAAACGATTTTTAAAGGATTAGAAAAGCTTAT
GATAGTTGAAATTGCTTTAAAAAAAGGAAAAGATGATCCTCAACTTATCTTTGAGAGCATGAACTCAAAAGGTATCGAAC
TCACGCAAACGGATTTGATCAGAAACTATATCATAATGGAAACAGAGGTTGAAAAACAGGAAGGCTTTTATAATAAATAT
TGGAGAACTATGGAGGAGGAATTTAAACAAAATAAAAAATTGTTTGATCGGTTTGTCCGGCATTACCTCACGATCAAAAC
AAGAGTCCCTAATATCAATAAGGTTTATGTAGCTCTCAAGGATTACCAGCAAAAAGAGGGGATAGGAATAGAGGATTTAT
TAAAAGATTTACAAAAATATTGCGGGTATTTTTGCCAGATCGCATTCAAAAAAGAAGCCGATAAGGATTTAAACAAGGCT
TTAAGTTTTTTGGTGGATTTAGAGATGGATGTGATTTATCCGCTATTACTAGAGCTTTATAGCGATTATAGCGATGGGGT
TTTATCCAAGGATGATTTTATCCCTATTATCGCTTTGATAGAGAGCTATATTTGCAGAAGGGCGGTGTGCGGGCTTGGTA
CAAATAGTCTCAATAAAGTCTTTCCCTCTTTTGCAAGACACATCCAAAAAGATGAATATTTTGAAAGCCTAAAGGCGCAT
TTTGGCTCTCTGACAGAAAAACAAAGATTTCCAAACAATGACGAGTTTAAAGATTGTTTTATTACGATAGATTTTTATAA
GTTTCAAAAAAAAGAATACTTTTTTGAAAGGCTAGAAAATTTTGACACAAAAGAGCCGGTCAATACCAAAGGACTAACCG
TTGAGCACATCATGCCTCAAAAACTCACGGAAGAATGGGAAAGGGATTTGGGTGAAAATTTTCAAGCAATACACGATAAA
TACCTCTATACAATAGGCAATCTCACTTGGACAGGCTATAACTATGAATACGGCAACAAATCTTTTCAAAAAAAACGAGG
CATGGAAGGAGGCTTCAAAGATAGCCCATTGAGACTCAATCAAGGTTTGAGGGATTTAAAATCTTTTGGCGAAGAAGAGA
TTAAAAAAAGAGCTAATGATTTAGCGGATTTGGCTTTAAAGATTTGGACTTATCCAAAGCTCGATGCAGAAACACTAGAG
AAATATAAACCCAAGAAAGACAAGAAAGAAAAAAAGGTTTATGATTTAAGCTCTTATAAGTTTGGCTCTCATTCAAGGGA
ATTATTTGATATTTTAAGCAAAGAGATTAAAGCTCTTGATAAAAGGATAACCGAAAATTTTAATCAAGATTATATCTCTT
ATAAGTTTGATAAAAATTTTGTGGATATTGTTGTGCAAACAAAAGACTTAAAATTGTATTTAAATATGAAATTCAATGAA
TTGCAAGATGAAAAAAATCTAGTAAGAGATATGACTAATAAAGGTCATTTAGGGAATGGGGACATAGAAGTCAAGCTAGA
AACAAAAGAGAATATCCCTTATTGTTTGGGGTTGATCAAACAGGCTTTAGAAAAACAGATGGGTGGTAGGAACAGGCAAT
AA

Protein sequence :
MEADATTLLKFINDNQKNQLVIPIYQRVYSWEKEQCKQLWDDIIKIGGDDKMDGHFIGSILYVLDRITHSNNALLIIDSQ
QRLTTITLLLTALRDRLNDEDEFLEKFSHQKIQNDYLINSDKDGDKKFRLILSESDKDTLLSLIDKDRRKPSEPSSKIVE
NFKLFEEWIRKNTNQLETIFKGLEKLMIVEIALKKGKDDPQLIFESMNSKGIELTQTDLIRNYIIMETEVEKQEGFYNKY
WRTMEEEFKQNKKLFDRFVRHYLTIKTRVPNINKVYVALKDYQQKEGIGIEDLLKDLQKYCGYFCQIAFKKEADKDLNKA
LSFLVDLEMDVIYPLLLELYSDYSDGVLSKDDFIPIIALIESYICRRAVCGLGTNSLNKVFPSFARHIQKDEYFESLKAH
FGSLTEKQRFPNNDEFKDCFITIDFYKFQKKEYFFERLENFDTKEPVNTKGLTVEHIMPQKLTEEWERDLGENFQAIHDK
YLYTIGNLTWTGYNYEYGNKSFQKKRGMEGGFKDSPLRLNQGLRDLKSFGEEEIKKRANDLADLALKIWTYPKLDAETLE
KYKPKKDKKEKKVYDLSSYKFGSHSRELFDILSKEIKALDKRITENFNQDYISYKFDKNFVDIVVQTKDLKLYLNMKFNE
LQDEKNLVRDMTNKGHLGNGDIEVKLETKENIPYCLGLIKQALEKQMGGRNRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPB8_729 YP_003728750.1 hypothetical protein Not tested cag PAI Protein 0.0 79