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Name : katA (HPF30_0458) Accession : YP_005774203.1 Strain : Helicobacter pylori F30 Genome accession: NC_017365 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 497071 - 498597 bp Length : 1527 bp Strand : + Note : - DNA sequence : ATGGTTAATAAAGATGTGAAACAAACTACTGCTTTTGGTGCTCCCGTTTGGGATGACAACAATGTGATTACGGCTGGCCC TAGAGGTCCTGTTTTATTGCAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGGATCCCTGAAAGGG TAGTGCATGCTAAAGGAAGCGGAGCTTATGGCACTTTCACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACCGAATGCTTTTTCAGATTTTCTACTGTGGCAGGGGAAAGAGGTGCTGCGGATGCGGT GAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGACTTGGTAGGGAATAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTTATCCACACTCAAAAACGAGACCCTCAAACCAATTTGCCTAACCCC GACATGGTGTGGGATTTTTGGAGTAGTGTTCCTGAAAGTTTGTATCAAGTAACATGGGTTATGAGCGATAGGGGTATTCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGCCTTATCAACGCTAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTTTAACCATGCAAGGCGTTAAGCACTTGACTAATGAAGAAGCCGCAGAAATCAGAAAACATGATCCTGAT TCCAATCAAAGGGATTTATTCAATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTAAGCATTCAAGTGATGCCCGA AGAAGATGCTAAGAAGTATCGATTCCATCCGTTTGATGTGACTAAAATTTGGTATCTCAAAGATTATCCATTGATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCACTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTGCAAGGACGCTTGTTCTCTTATGGGGACACACACCGCTACCGCTT AGGGGTTAATTATCCTCAGATACCGGTTAATAGACCAAGGTGTCCGTTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGATACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCAGGTTATAAAGAAGATAAGAGCGCGAGGGATCCT AAGTTCAATTTAGCTCATATTGAAAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGAAGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGTATGACACTATTGGAGAGTCTTTAGCTC ATGTTACCCATAAAGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGACATGCATGGAAAAGACATGCACCACATGAAAAAGAA AAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGAADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNP DMVWDFWSSVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFLTMQGVKHLTNEEAAEIRKHDPD SNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLKDYPLMEVGIVELNKNPENYFAEVEQAAFTPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERLYDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHDMHGKDMHHMKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-136 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 9e-93 | 52 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
