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Name : serS (HPF30_1348) Accession : YP_005775093.1 Strain : Helicobacter pylori F30 Genome accession: NC_017365 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1431160 - 1432407 bp Length : 1248 bp Strand : - Note : - DNA sequence : ATGATTGATAAAAAACTTTTATTGCAAGATTTTGAGATGGTGGCTCTTTCTTTAAAAAAGCGTAATAATGCGATGGATGA CGAATTGGAGCGCTTGCGCGAAGTCATCACGCATTATAAAAAGCAACTCATTGAATTAGAAAGCTTGCAAGCCTTTCAAA ACAAGGTCTCTAAAGAATTTGGTATCAAAATGGCTCAAAAAGTGGATACAAGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTCCAAAAGCGTGGGCGAATTGGAACAACAAATAGATTTAAAGCTTTCAATAATCCCTAA TCTGGTGGATGAAAAAACCCCTTTAGGCGCAAGCGAAGAAGACAATATAGAGATTAAAAAAATCTTAACCCCTAGAAATT TCACTTTCAAACCCAAAGAACATTTTGAACTCGCTCAACAAAATGGCTGGATTGATTTTGAAAGCGGCGTGAAACTCGCT AAAAGCCGTTTTTCTGTCATTAGGGGTTTTGGGGCTAAAATTTATCGCGCGCTCATCCATTTAATGTTAGATTTTAATGA AAAAAATGGCTTTGAAATCATCTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACCGGGCAATTGCCCAAAT TCAAAGAAGATGTTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCCACCTCTGAAGTAACGCTCACCAATCTATAC AACGACACGATTGTTAGCGTTGAAAAACTCCCTATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGCGAAGCAGGGAG CGCGGGCAAGGACACAAGGGGGATGATAAGACAGCACCAATTTGATAAAGTAGAGCTAGTGGCTATCACGCACCCTAAAG AAAGCGATGTCATGCAAGAGCATATGCTAGAGAGCGCGAGCGAAATTTTAAAGGCTTTGGAATTACCGCACCGGTTTGTG CAATTGTGCAGCGCGGATTTAGGCTTTAGCGCGAGCAACACGATAGATATTGAAGTGTGGCTTCCTGGGCAAAATTGCTA CAGAGAAATCAGCTCCGTGTCTAATACGAGGGATTTTCAAGCCAGGCGCGCAAAAATCCGCTTCAAAGAAAATCAAAAAA ACCAATTAGTGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATCCACATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNKVSKEFGIKMAQKVDTSDLKKELENN KIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTSEVTLTNLY NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDVMQEHMLESASEILKALELPHRFV QLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLVHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-77 | 45 |
