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Name : ureC (HPF30_1228) Accession : YP_005774973.1 Strain : Helicobacter pylori F30 Genome accession: NC_017365 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : - COG ID : - EC number : - Position : 1304829 - 1306538 bp Length : 1710 bp Strand : + Note : - DNA sequence : ATGAAAAAGATTAGCAGAAAAGAATATGCTTCTATGTATGGCCCTACTACAGGCGATAAAGTGAGATTGGGCGATACAGA CTTGATCGCTGAAGTAGAACATGACTACACCATTTATGGCGAAGAGCTTAAATTCGGTGGCGGTAAAACTTTGAGAGAAG GCATGAGCCAATCCAACAACCCTAGCAAAGAAGAACTGGATTTAATCATCACTAACGCTTTAATCGTGGATTACACCGGT ATTTATAAAGCGGATATTGGTATTAAAGATGGCAAAATCGCTGGCATTGGCAAAGGCGGTAACAAAGACATGCAAGATGG CGTTAAAAACAATCTTAGCGTGGGTCCTGCTACTGAAGCGCTAGCTGGTGAAGGTTTGATCGTAACTGCTGGTGGTATTG ACACACACATCCACTTCATCTCCCCCCAACAAATCCCTACAGCTTTTGCAAGCGGTGTAACAACTATGATTGGTGGCGGA ACTGGCCCTGCTGATGGCACTAACGCGACCACTATCACTCCAGGCAGAAGAAACTTAAAATGGATGCTCAGAGCGGCTGA AGAATATTCCATGAACTTAGGTTTCTTAGCTAAAGGTAACGCCTCTAACGATGCGAGCTTAGCCGATCAAATTGAAGCCG GTGCGATTGGCTTTAAAATCCACGAAGACTGGGGAACAACTCCTTCTGCAATCAATCATGCGTTAGATGTTGCGGACAAA TACGATGTGCAAGTCGCTATCCACACAGACACTTTGAATGAAGCCGGTTGCGTAGAAGACACTATGGCAGCCATTGCCGG ACGCACTATGCACACTTTCCACACTGAAGGCGCTGGCGGCGGACACGCTCCTGATATTATTAAAGTAGCCGGCGAACACA ACATTCTGCCCGCTTCCACTAACCCCACTATCCCTTTCACCGTGAATACAGAAGCAGAACACATGGACATGCTTATGGTG TGCCACCACTTGGATAAAAGCATTAAAGAAGATGTTCAGTTCGCTGATTCAAGGATTCGCCCTCAAACCATTGCGGCTGA AGACACTTTGCATGACATGGGGATTTTCTCAATCACTAGTTCTGACTCTCAAGCTATGGGTCGTGTGGGTGAAGTTATCA CCAGAACTTGGCAAACAGCTGACAAAAACAAAAAAGAATTTGGCCGCTTGAAAGAAGAAAAAGGCGATAACGACAACTTC AGAATCAAACGCTACTTGTCTAAATACACCATTAACCCAGCGATCGCTCATGGGATCAGCGAGTATGTAGGTTCTGTAGA AGTGGGCAAAGTGGCTGACTTGGTATTGTGGAGTCCCGCATTCTTTGGCGTGAAACCCAACATGATCATCAAAGGCGGAT TCATTGCGTTAAGTCAAATGGGCGATGCGAACGCTTCTATCCCTACCCCACAACCGGTTTATTACAGAGAAATGTTCGCT CATCATGGTAAAGCCAAATACGATGCAAACATCACTTTTGTATCCCAAGCGGCTTATGACAAAGGCATTAAAGAAGAATT AGGTCTTGAAAGACAAGTGTTGCCGGTAAAAAATTGCAGAAACATCACTAAAAAAGACATGCAATTCAACGACACTACCG CTCACATTGAAGTCAATCCTGAAACTTACCATGTGTTCGTAGATGGTAAAGAAGTAACTTCTAAACCAGCCAATAAAGTG AGCTTGGCGCAACTCTTTAGCATTTTCTAG Protein sequence : MKKISRKEYASMYGPTTGDKVRLGDTDLIAEVEHDYTIYGEELKFGGGKTLREGMSQSNNPSKEELDLIITNALIVDYTG IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQQIPTAFASGVTTMIGGG TGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNASNDASLADQIEAGAIGFKIHEDWGTTPSAINHALDVADK YDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMV CHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNF RIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFA HHGKAKYDANITFVSQAAYDKGIKEELGLERQVLPVKNCRNITKKDMQFNDTTAHIEVNPETYHVFVDGKEVTSKPANKV SLAQLFSIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 2e-157 | 62 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 2e-157 | 62 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-146 | 60 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-146 | 60 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-146 | 60 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-146 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_005774973.1 | urease subunit alpha | VFG0270 | Protein | 0.0 | 99 |
