Gene Information

Name : HPF30_1167 (HPF30_1167)
Accession : YP_005774912.1
Strain : Helicobacter pylori F30
Genome accession: NC_017365
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1238064 - 1238921 bp
Length : 858 bp
Strand : -
Note : -

DNA sequence :
ATGATGCAAGGCTTGTTTTTGTTCTTTGAATATTTTGATAATAGGATTAAGCTCAAATCCTTGCACAATCTAGCAGAAGA
ACAGATTATAGACTTCTTATTTGGATTAGCCAAAAACAGGAAGCCAAGCTCTATGGCTAAATATGTGATGTATTTAAGAC
AATTCTTTGATTGTTTAGACAGAAAAAGAAACTATAGCTTTGATTTTGAACTTAAAAATCTATCGTTTGCCAAGAAAGAA
ACGCATTTGCCTAAACATTTGAATAAAAATGATTTTAAGGCTTTTGTTCAAGCTCTTCTAAAATACCATCCCAAAACCAG
TTTTGAAAAACGCAATCAGTGTATTTTGCTGCTTATTGCATTAGGGGGGTTAAGGAAGTTTGAAGCCTTATATTTGGAGC
TAAAAAACATTGCTTTAGAAAATAACCACTACCGCCTTTTAATCAAAGACAAAAACAACAAAGAGAGATACGCTTATATT
GAAAAAGAGTTTTTGCAAGTTCCTTTGAATGCGTGGCTAAGCGATACCAAACGATTAAAGAGTTTTAAGGGGCGTTTTGT
GTTTAAGAAAGCAAAAAACAACACCACACAAAAAACTTGCTCTTTAAAGGGCTTTATCGCTAAAATTTTTAAGCTCTCTA
ATATTGATGTAAAATCTTATGGATTAGGTTTGCATCTTTTTAGGCATAGTTTTGCCACTTTTATTTATGATGAAACACAG
GATTTGGTTTTAACTTCAAGAGCGTTAGGGCATAGTTCTTTGCTTTCTACTAAAATCTATATCCATACCACTCAAGAACA
CAATAAAAAAGTGGCTCTTGTGTTAGGGGGGGTATTAAGAAATGAAAAAAGCGAGTAG

Protein sequence :
MMQGLFLFFEYFDNRIKLKSLHNLAEEQIIDFLFGLAKNRKPSSMAKYVMYLRQFFDCLDRKRNYSFDFELKNLSFAKKE
THLPKHLNKNDFKAFVQALLKYHPKTSFEKRNQCILLLIALGGLRKFEALYLELKNIALENNHYRLLIKDKNNKERYAYI
EKEFLQVPLNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQ
DLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGVLRNEKSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPP12_0437 YP_002301073.1 integrase/recombinase XercD family Not tested cag PAI Protein 1e-119 97