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Name : HPLT_04160 (HPLT_04160) Accession : YP_005772955.1 Strain : Helicobacter pylori Lithuania75 Genome accession: NC_017362 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.3 Position : 830855 - 832120 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATCAAAGACAGGGCCGGCGTGGAAATTGGGATTAAAAAAGCGGTGGTGCGAGATGTGAAAAAACACAAGGGCT ATGCTTTTGAAATCAGTGATGATCTAGAAAGCCTGATAGAAGATAAAGAAATTGATATTATCGTGGAGCTTATGGGTGGG GTGGAAGCACCCTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTAGC GTACCACCGCTACGAATTAGAACAAACCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCCA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCACAACATTTAGGCTACGCGGAATT GAACCCTGAATTTGACATTAAAGGCATTGATGCGGCGCACAAATTGTTGATTTTAGCGTCTTTAGCGTATGGCATTGATG CGAAATTAGAAGAAATCTTGATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAGTTTGCTAAAGAGTTTGGTTAT AGCATCAAACTTTTAGGCATCGCTAAAAAACACCCAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAATGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGAAAAAAAAGCTCTCTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGTTTGTT GGTGAGCGACGAAAAAGGGGTTTTTTCTCAAATTAGCGCGATTTTAGCTCAAAATGATATTTCGCTCAACAATGTCTTAC AAAAAGAAATCCCGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAATCTATGCTGAACGCC CTTAAAGAACTTGAAAATTTACAAAGCGTGTTGGATACCCCTAAGATGATCCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIGIKKAVVRDVKKHKGYAFEISDDLESLIEDKEIDIIVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQTAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHPDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEIPHSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 1e-67 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 1e-67 | 41 |
