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Name : HPLT_03820 (HPLT_03820) Accession : YP_005772891.1 Strain : Helicobacter pylori Lithuania75 Genome accession: NC_017362 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 767111 - 768424 bp Length : 1314 bp Strand : + Note : COG2056 Predicted permease DNA sequence : ATGCTAGAAAATAGCTCTGTATGGAGCAATCCTGCCTTTGTGGCTATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATTAGCGCAACTCTCATAGCAGGACTTATGGGAGGGCTTGGGATCACAGAGAGTTTTAATG TAATGATAGACGGCATGAAAGGCAATTTAAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAATCTCATTAAAGTCGCTTTGAGTAAATTAATAGGTTTAATGGATTACAAGCGATCCACTTTTTGCTTTTTGAT CGCTTTCATCGCATGTTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCTCCTCTTTTGC ATTTAATGAACCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGCGCTTTAACCTTTGGCTTGCAAGCCCCCTATTTGGTG CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCTAATGGCGTTAGCACCACCATAGC GCAAATTACAGGAGTGATGTGGATAGCGGGGTTAGCGATGGTTGTTGGGCTATTTTTAGCGGTATTAACGCTATACAAAA AACCCAGGCGCTACAAAGAAAAATCTTTTGATATAGAAAATTACGCCTCGCTTCAATTAAACTACCATGATTACTTGACT TTTATAGGGATTGTCGTGGCGTTTGTGATCCAATTAGCCACCGATTCGATGCCCTTAGCCGCCTTTTTAGCGTTAGCGAT TATCTTACTAGGGCGTGGCATTAAGTTTAAAGAAACAGACTCTTTAATGGACGATAGCGTAAAAATGATGGCGTTTATCG CTTTTGTGATGCTAGTGGCTAGCGGGTTTGGAGAAGTGTTGCAAAAAGTGCATGCGATAGAGGGCTTAGTGAATGCGATC ACAAGCATAATCCAAGGGAAGCTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTGTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACGATTCCTATCATTGCTGTGTTTTATGTCCCTTTATGCGCAAAATTAGGTTTTAGCGTAGAATCTACGA TTTTACTCATCGGCATAGCTGCAGCTTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCCACTTGCGGG CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATTGT TTTTGGAGTGGTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSVWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGITESFNVMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALSKLIGLMDYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSTTIAQITGVMWIAGLAMVVGLFLAVLTLYKKPRRYKEKSFDIENYASLQLNYHDYLT FIGIVVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNAI TSIIQGKLLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSVESTILLIGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLIVFGVVGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 3e-58 | 42 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 3e-58 | 42 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 3e-58 | 42 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 3e-58 | 42 |
