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Name : HPLT_02670 (HPLT_02670) Accession : YP_005772677.1 Strain : Helicobacter pylori Lithuania75 Genome accession: NC_017362 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein H Function : - COG functional category : - COG ID : - EC number : - Position : 531766 - 532878 bp Length : 1113 bp Strand : - Note : COG0249 Mismatch repair ATPase (MutS family) DNA sequence : ATGGCAGGTACACAAGCTATATATGAATCATCTTCTGCAGGATTCTTATCGGAAATTTCCTCAATCATCTCAAGCACAAG TGGTGTTGCAGGGCCATTTGCAGGAATAGTAGCGGGTGCTATGTCAGCAGCGATTATTCCTATTGTTGTGGGATTTACTA ATCCGCAAATGACCGCTATCATGACCCAATACAATCAGAGCATCGCTGAAGCCGTAAGCATGCCTATGAAAGCCGCTAAC CAACAATACAACCAATTGTATCAAGGTTTTAACGATCAAAGCATGGCTGTGGGGAACAATATCTTAAATATTAGCAAATT AACAGGGGAATTTAACACGCAAGGCAACACGCAAGGTGCGCAAATTAGTGCTGTTAATAGTCAGATTGCGAGCATTTTAG CGAGTAACACTACCCCTAAAAATCCCAGCGCTATTGAAGCTTATGCGACGAATCAAATCGCTGTTCCTAGTGTGCCAACA ACGGTTGAAATGATGAGCGGTATATTAGGCAATATTACAAGCGCAGCACCAAAATACGCCCTAGCTCTACAAGAGCAACT GCGTTCTCAAGCAAGCAACAGCTCAATGAATGATACAGCCGATTCCCTTGATAGCTGTACCGCTTTAGGTGCACTTGTTG GCTCATCAAAAGTGTTTTTTAGTTGCATGCAAATTTCTATGACGCCCATGAGTGTTTCTATGCCCACTGTTTATGCCAAA TACCAAGCGTTAGCTACTAATGCCCTAACTTCAGGCGCTAATCCTATGACCACTCCTGCATGCCCTATTGGGGACAAAGT TCTTGCCGTTTATTGCTATGCTGAAAAAGTAGCAGAAATTTTGAGAGAATACTATATAGAATTTGTGAAAAACAATACCA ATTTGTTGCAGAACGCTTCTCAAATGATACTTAATCAATCAGGATTAGCTACTAGCACCTATGACACTCAAGCGATTTCT AACATAAGCTCGCTATATAATTACAATATAGTAGCGAATAAATCTTTTTTGAAATCGCATTTGACTTATCTTGATTACAT CAAAGACAAGCTTAAGGGGCAAAAAGATAGCTACTTAACAGAAAGGGTGCAAACTAAAATAATCGTGAAGTGA Protein sequence : MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAAN QQYNQLYQGFNDQSMAVGNNILNISKLTGEFNTQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT TVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAK YQALATNALTSGANPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAIS NISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cagH | YP_005777282.1 | cag island protein | Virulence | cag PAI | Protein | 2e-159 | 99 |
| HP0541 | BAD13929.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-160 | 99 |
| HP0541 | BAD13902.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-158 | 99 |
| cagH | YP_005779052.1 | cag island protein | Virulence | cag PAI | Protein | 2e-159 | 99 |
| HP0541 | BAD13957.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-160 | 99 |
| cagH | YP_003728723.1 | cag pathogenicity island protein H | Virulence | cag PAI | Protein | 2e-159 | 99 |
| cagH | AGC69803.1 | cag pathogenicity island protein H | Virulence | cag PAI | Protein | 5e-160 | 99 |
| HP0541 | BAD14066.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-159 | 99 |
| HP0541 | NP_207337.1 | cag pathogenicity island protein (cag20) | Virulence | cag PAI | Protein | 1e-159 | 99 |
| cag20 | AAR03903.1 | Cag20 | Virulence | cag PAI | Protein | 3e-160 | 99 |
| HP0541 | BAD14039.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-159 | 99 |
| cag20 | AAR03875.1 | Cag20 | Virulence | cag PAI | Protein | 1e-160 | 99 |
| HP0541 | BAD13847.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-159 | 99 |
| cagH | YP_005775741.1 | cag island protein | Virulence | cag PAI | Protein | 1e-159 | 99 |
| cag20 | AAR03933.1 | Cag20 | Virulence | cag PAI | Protein | 1e-160 | 99 |
| HP0541 | BAD13793.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-159 | 99 |
| cagH | AAC44699.1 | CagH | Virulence | cag PAI | Protein | 3e-161 | 99 |
| HP0541 | BAD13874.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-160 | 99 |
| cagH | YP_005774530.1 | cag island protein | Virulence | cag PAI | Protein | 8e-159 | 99 |
| cag20 | AAR03964.1 | Cag20 | Virulence | cag PAI | Protein | 7e-160 | 99 |
| HP0541 | BAD13984.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-159 | 98 |
| cagH | NP_223207.1 | cag island protein | Virulence | cag PAI | Protein | 6e-160 | 98 |
| HP0541 | BAD13820.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 9e-158 | 98 |
| HP0541 | BAD14012.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-158 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPLT_02670 | YP_005772677.1 | cag pathogenicity island protein H | VFG0300 | Protein | 5e-160 | 99 |
