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Name : HPLT_02610 (HPLT_02610) Accession : YP_005772666.1 Strain : Helicobacter pylori Lithuania75 Genome accession: NC_017362 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein (cag7, cagY) Function : - COG functional category : - COG ID : - EC number : - Position : 513266 - 519031 bp Length : 5766 bp Strand : - Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAATGAAGAAAACGATAAACTTGAAACTTCTAAAAAAACCCAACAAGATTCACCCCAAGATTTATCCAATGAAGAAGC GACAGAAGTCAATCATTTTGAAGATCTTTTAAAAGAAGAAAGCTCAGACAATCATCTTGACAACCCCACAGAAACTAAAA CCCATTTTGATGGAGACAAGTCAGAAGAAACCCAAACTCAAATAGATTCTGAAGGTAATGAAACTTCAGAATCTAGCAAT GGCAGTCTGGCAGATAAGTTATTCAAGAAAGCCAGAAAATTAGTTGATGATAAAAGACCTTTCACTCAGCAAAAGAGTTT AGATGAAGAAGCCCAAAAACTGAACGAAGAAGACGATCAAGAAAATAATGAGTATCAAGAAGAAACTCAAATAGACTTAA TTGATGATGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCGACAGAAGTCAATCAT TTTGAAGATCTTTTAAAAGAAGAAAGCTCAAACAATCATCTTGACAACCCCACAGAAACTAAAACCCATTTTGATGGAGA CAAGTCAGAAGAAACCCAAACTCAAATAGATTCTGAAGGTAATGAAACTTCAGAATCTAGCAATGGCAGTCTGGCAGATA AGTTATTCAAGAAAGCCAGAAAATTAGTTGATGATAAAAGACCTTTCACTCAGCAAAAGAGTTTAGATGAAGAAGCCCAA AAACTGAACGAAGAAGACGATCAAGAAAATAATGAGTATCAAGAAGATACTCAAATAGACTTAATTGATGATGAAACTTC TAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCGACAGAAGTCAATCATTTTGAAGATCTTTTAA AAGAAGAAAGCTCAGACAATCATCTTGACAACCCCACAGAAACTAAAACCCATTTTGATGGAGACAAGTCAGAAGAAATA ACTAACGACTCTAACGATCAAGAGATTATCAAAGGAAGCAAAAAAAAATACATTATTGGTGGCATTGTAGTCGCTGTTCT TATCGTGATTATTTTATTTTCTAGAAGCATTTTTCACTACTTCATGCCTTTGGAAGATAAAAGCTCTCGTTTTAGCAAAG ACAGGAATCTTTATGTCAATGATGAAATCCAAATAAGGCAAGAGTATAACCGATTGCTGAAAGAACGGAATGAAAAAGGC AATATGATCGATAAAAATCTTTTCTTCAATGACGATCCTAATAGAACCTTATACAACTATTTGAATATTGCAGAAATTGA GGACAAAAACCCGTTGAGAGCCTTTTATGAGTGTATTGGTAATGGTGGCAACTATGAAGAATGTTTGAAGCTTATCAAAG ACAAAAAACTTCAAGAGCAAATGAAAAAGACTTTAGAGGCTTATAATGACTGCATCAAAAATGCCAAAACTGAAGAAGAA AGGATCAAGTGTTTAGATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTACTGAACCAACAAAAAGTTCAGGTGGCGCT AGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAACGAGTGCTTGAAACTCATAAATGACCCTGAGATTAGAGAGA AATTCCGTAAGGAATTAGAGCTTCAAAAAGAGCTTCAAGAGTATAAGGATTGTATCAAAAACGCCAAAACAGAGGCTGAG AAAAATGAATGCTTGAAAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAACAGCAAGCGCTAGATTGTTTGAAAAACGC TAAAACCGATGAAGAACGAAACGAGTGCTTAAAAAATATTCCCCAAGACTTGCAAAAAGAACTACTAGCTGATATGAGCG TCAAGGCTTATAAGGACTGCGTTTCAAAAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAA GCGAGGAAAAAGTTAGAACAACAGGTTCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAAAAAGTGTTTGAA AGATCTCCCTAAAGACTTACAAAGCGATATTTTAGCTAAAGAGAGTCTGAAAGCTTATAAAGACTGCGTATCAAGAGCCA AAAACGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAG AGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAACTGAGAAAAAAGAATGCGAGAAATTGCTCACCCC TGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAG CTGAGAAAAAAGAATGCGAAAAATTACTCACGCCTGAAGCGAAAAAACTTTTAGAGCAACAAGCGCTAGATTGTTTGAAA AACGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAGA GAGCGTTAAAGCTTATTTGGACTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACCC CTGAAGCGAGGAAACTCTTAGAAGAGGCTAAAGAGAGTCTGAAAGCTTATAAAGACTGCGTATCAAGAGCCAAAAACGAA GCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTCTTAGAAGAAGAAGCCAAAGAGAGCGTTAA TGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAACTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGA AAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAA AAAGAATGCGAAAAATTACTCACGCCTGAAGCGAAAAAACTTTTAGAGCAACAAGCGCTAGATTGTTTGAAAAACGCTAA AACCGAAGCTGAGAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAGAGAGCGTTA AAGCTTATTTGGACTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCG AGGAAACTCTTAGAAGAGGCTAAAGAGAGCCTGAAAGCTTATAAAGACTGCGTATCAAGAGCCAAAAACGAAGCTGAGAA AAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAGAGAGCGTTAAAGCTTATAAAG ACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAAAAATTGCTCACGCCTGAAGCGAAAAAACTTTTA GAGCAACAAGCACTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGA CTTGCAGAAAAAGGTTTTAGCTAAAGAAAGCGTTAAGGCTTATTTGGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGA AAAAAGAATGCGAGAAATTACTCACGCCTGAAGCGAAAAAACTTTTAGAAGAGGCTAAAGAGAGCCTTAAAGCTTATAAA GACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAATTGCTCACCCCTGAAGCGAGGAAACTCTT AGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAAT GCGAGAAATTACTCACGCCTGAAGCGAGGAAATTTTTAGCGAAGCAAGTGCTAAATTGTTTGGAAAAAGCTGGAAATGAA GAAGAAAGAAAAGCATGTCTTAAAAATCTCCCTAAAGACTTACAGGAAAATGTTTTAGCTAAAGAGAGCCTTAAAGCTTA TAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAACTACTCACCCCTGAAGCGAGGAAAC TCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGACTGCGTATCAAGAGCTAGGAATGAAAAAGAAAAACAG GAATGCGAGAAATTACTCACCCCTGAAGCGAGAAAGTTCTTAGCGAAAGAACTCCAACAAAAAGATAAAGCGATCAAAGA TTGCTTGAAAAACGCCGATCCTAACGACAGAGCGGCTATCATGAAGTGTTTGGATGGTTTGAGCGATGAAGAGAAGCTCA AATACCTGCAAGAAGCTAGAGAAAAGGCTGTCTTGGATTGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAGGAAATGC CAAAACCTTTATAGCGATTTGATCCAAGAAATCCAAAATAAAAGGACACAAAACAAACAAAATCAATTGAGTAAAACAGA AAGATTGCATCAAGCAAGCGAGTGCTTGGATAACTTAGATGACCCTACCGATCAACAAGCCATAGAGCAATGTTTAGAGG GCTTGAGCGATAGTGAAAGGGCGCTAATTCTAGGAATTAAACGACAAGCTGATGAAGTGGATCTGATTTATAGCGAACTA AGAAACCGCAAAACCTTTGATAACATGGCGGCTAAAGGTTATCCGTTGTTGCCAATGGATTTCAAAAATGGCGGCGATAT TGCCACTATTAACGCTACTAATGTTGATGCGGACAAAATAGCTAGCGATAATCCTATTTATGCTTCCATAGAGCCTGACA TTACCAAACAATACGAAACAGAAAAAACCATTAAGGATAAGAATTTAGAAGCTAAATTAGCTAAGGCTTTAGGTGGCAAT AAAAAAGATGACGATAAAGAAAAAAGTAAAAAATCCACAGCAAAAGCTAAAGCAGAAAGCAATAAGATAGACAAAGATGT CGCAGAAACTGCTAAGAATATCAGTGAAATCGCTCTTAAGAACAAAAAAGAAAAGAATGGGGAATTTGTAGATGAAAATG GTAATCCCATTGACGATAAAAAGAAAGAAGAAAAACAAGATGAAACAAGCCCTGTCAAACAGGCCTTTATAGGCAAGAGT GATCCCACATTTGTTTTAGCGCAATACACCCCTATTGAAATCACTCTGACTTCTAAAGTAGATGCCACTCTCACAGGTAT AGTGAGTGGGGTTGTAGCCAAAGATGTATGGAACATGAACGGCACTATGATCTTACTAGACAAAGGCACTAAGGTGTATG GGAATTATCAAAGCGTGAAAGGTGGCACACCTATTATGACACGCTTAATGATAGTTTTTACTAAAGCCATTACGCCTGAT GGTGTGATAATACCTCTAGCAAACGCTCAAGCAGCAGGCATGTTGGGTGAAGCAGGGGTAGATGGCTATGTGAATAATCA TTTTATGAAGCGCATAGGCTTTGCTGTGATAGCAAGCGTGGTTAATAGCTTCTTGCAAACTGCGCCTATCATAGCTCTAG ATAAACTCATAGGCCTTGGCAAAGGCAGAAGTGAAAGGACACCTGAATTTAATTACGCTTTGGGTCAAGCTATCAATGGT AGTATGCAAAGTTCAGCTCAGATGTCTAATCAAATTCTAGGGCAACTGATGAATATCCCCCCAAGTTTTTACAAAAACGA GGGCGATAGTATTAAGATTCTCACAATGGACGATATTGATTTTAGTGGCGTGTATGATGTTAAAATTACCAATAAATCTG TGGTAGATGAAATTATCAAACAAAGCACCAAAACTTTGTCTAGAGAACATGAAGAGATCACCACAAGCCCCAAAGGTGGC AATTAA Protein sequence : MNEENDKLETSKKTQQDSPQDLSNEEATEVNHFEDLLKEESSDNHLDNPTETKTHFDGDKSEETQTQIDSEGNETSESSN GSLADKLFKKARKLVDDKRPFTQQKSLDEEAQKLNEEDDQENNEYQEETQIDLIDDETSKKTQQHSPQDLSNEEATEVNH FEDLLKEESSNNHLDNPTETKTHFDGDKSEETQTQIDSEGNETSESSNGSLADKLFKKARKLVDDKRPFTQQKSLDEEAQ KLNEEDDQENNEYQEDTQIDLIDDETSKKTQQHSPQDLSNEEATEVNHFEDLLKEESSDNHLDNPTETKTHFDGDKSEEI TNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKG NMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPLRAFYECIGNGGNYEECLKLIKDKKLQEQMKKTLEAYNDCIKNAKTEEE RIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEAE KNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKECEKLLTPE ARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKDCVSRAKNEAEKKECEKLLTPEAKKLLEEEAKE SVKAYLDCVSQAKTETEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEQQALDCLK NAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKLLEEAKESLKAYKDCVSRAKNE AEKKECEKLLTPEAKKLLEEEAKESVNAYLDCVSQAKTETEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKTEAEK KECEKLLTPEAKKLLEQQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKKECEKLLTPEA RKLLEEAKESLKAYKDCVSRAKNEAEKKECEKLLTPEAKKLLEEAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLL EQQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYK DCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKQVLNCLEKAGNE EERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQ ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKC QNLYSDLIQEIQNKRTQNKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDLIYSEL RNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKNLEAKLAKALGGN KKDDDKEKSKKSTAKAKAESNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKEEKQDETSPVKQAFIGKS DPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPD GVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAING SMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGG N |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0527 | BAD14052.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| HP0527 | NP_207323.1 | cag pathogenicity island protein (cag7) | Virulence | cag PAI | Protein | 0.0 | 95 |
| HP0527 | BAD14026.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| cagY | YP_005777271.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| HP0527 | BAD13833.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| HP0527 | BAD13970.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| cagY | AGC69792.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 95 |
| cagY | YP_005774542.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 94 |
| HP0527 | BAD13888.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 93 |
| cagY | AGC69786.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 93 |
| cagY | AGC69789.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 93 |
| HP0527 | BAD13998.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 92 |
| cagY | AGC69787.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 91 |
| HP0527 | BAD13806.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 87 |
| HP0527 | BAD13860.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 86 |
| cagY | YP_005775730.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 86 |
| orf13/14 | NP_223194.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 75 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPLT_02610 | YP_005772666.1 | cag pathogenicity island protein (cag7, cagY) | VFG0287 | Protein | 0.0 | 95 |
