|
Name : hemC (HPLT_01235) Accession : YP_005772404.1 Strain : Helicobacter pylori Lithuania75 Genome accession: NC_017362 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : - COG ID : - EC number : 2.5.1.61 Position : 238187 - 239107 bp Length : 921 bp Strand : - Note : COG0181 Porphobilinogen deaminase DNA sequence : GTGGGAAAATTAGTGATTGGCTCTAGGGGGAGCGAACTAGCCTTATGGCAAGCGAATCACATTAAAGAGCGCCTGAAAAA AGAATGCTTGATAGAAAGCGAGATTCAAATCGTTAAGACTAAGGGCGATAAAATCTTAGACACCCCTTTAAATAAGATTG GCGGTAAGGGGCTATTCACTAAGGAATTGGAAGAATTGCTTTTAAAAGGTGAAATTGATTTGGCGGTGCATTCTTTAAAA GACGTGCCGGTCGTGTTTGAAAAGGGGTTGGACTTGGCATGCATCACTAAAAGGGCTGATGTGAGGGACACTTTTTTAAG CGTGAAATTCCCTGATTTGATGAGTTTGCCTAAAGGAGCCAAGGTTGGCACGACTTCTTTAAGGCGCTCCATGCAGCTCA AATTAAAGCGCCAGGATTTGGACACAGAAAGCTTAAGAGGGAATGTCCAAACCCGTTTGAAAAAGCTTGAATGCGGTGAA TTTGACGCTATTATTTTAGCTGAAGCCGGGTTATGTCGCCTAGAAATTCAAGGAGCGAAATACCGCAAGGCTTTTAGCGT GGAAGAAATGATTCCTAGCATGGGTCAGGGGGCTTTAGGGGTGGAAATGCTCAAAAACCACAAGCATTTTGCCACGCTCC AAAAACTCAACGATGCAAAAAGCGCGTTTTGCTGCCGTTTAGAAAGGGAGTTTATCAAAGGGCTTAATGGGGGGTGTCAG ATCCCTATAGGCGTGCATGCGAGTTTAGTGGGTGATAGGGTTAAAATCCAGGCGGTTTTAGGCTTGCCTAACGGGAAAGA AGTCATTACTAAAGAAAAGCAAGGGGATAAAACTAAAGCGTTTGATTTAGTTCAAGAGCTTTTAGAAGAATTTTTGCAAA GCGGGGCTAAAGAGATTTTAGAAAAGGCGCAGTTGTTTTAA Protein sequence : MGKLVIGSRGSELALWQANHIKERLKKECLIESEIQIVKTKGDKILDTPLNKIGGKGLFTKELEELLLKGEIDLAVHSLK DVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGE FDAIILAEAGLCRLEIQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFATLQKLNDAKSAFCCRLEREFIKGLNGGCQ IPIGVHASLVGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKEILEKAQLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 5e-44 | 46 |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 5e-44 | 46 |
