|
Name : HPLT_07655 (HPLT_07655) Accession : YP_005773631.1 Strain : Helicobacter pylori Lithuania75 Genome accession: NC_017362 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : - COG ID : - EC number : - Position : 1520655 - 1521722 bp Length : 1068 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGCTAAATAACAAACTCACTAAATCTCAGAGAGAACTCTTTTGTAATCTCAAAGCCTTTTTATACACTAAGGCTAAAAA CTTCACGCCCATTCAAGATGTGAAGGATATGGCTTTAATCCTAGACACACAAGATAAAATCTTAAAATGTCATAATATAG AGCAATTAAAACAACTCTGTCATATTCTTTATAATCAAGGCATTAAACACACTATAATGATGCAAGGCTTGTTTTTATTC TTTAACTATTTTAAAGATAATCTCAAATTAAGAAGTTTTAGAATGCTTAGCGAAGAGCAAGTGATTAACTTTCTCTTTGA ACTCGCTCAAAATAGAAAACCCAGCTCTATGGCTAAGTATGTGATGTATTTAAGACAATTCTTTGATTATTTGGATAGAA AAAGGCGTTATAGCTTTGATTTTACGCTTAAAAACCTAGCCTTTGCTAAGACCAAAGAAAGCTTACCCAGACATTTAAAC GATAAAGACTTAAAGAGTTTTTTAAAAACACTCTTAGACTATAAGCCAGCTACAAGCTTTGAAAAACGCAATAAGTGTAT TCTACTTATTGTAATACTTGGGGGACTTAGAAAATACGAAGTGTTAAACATAGAATTAAAACACATTCAAGTAGAAGAGC AAAACTACTCTATTTTAATTCAAGGTAAAGGTAGAAAAGAGAGAAAAGCTTATATTAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGAATATAGACTAAAATATTTTAATGGGGCATATCTTTTTAAAAAAGACAAACAAAAAGC ACAAAATTCTTTAACGCTTTATAACTTTATCCCCTTAATCTTTAAACTAGCTCAAATCAAACACTATAAGCAATATGGCA CAGGCTTACATCTATTTAGGCATAGTTTTGCAACACTCATTTATCAAGAAACCCAAGACTTAGTTTTAACTTCAAGGGCG TTAGGGCATAGCTCCTTACTCTCTACTAAGATTTATATTCATACCACACAAGAGCATAACAAGAAAGTGGCTCTTGTGTT TGATAGTTTGATAGAGAACAAAAAGTAA Protein sequence : MLNNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLCHILYNQGIKHTIMMQGLFLF FNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLN DKDLKSFLKTLLDYKPATSFEKRNKCILLIVILGGLRKYEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDEYRLKYFNGAYLFKKDKQKAQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 1e-101 | 64 |
