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Name : HPSA_04705 (HPSA_04705) Accession : YP_005771530.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Virulence Product : comB9-like competence protein Function : - COG functional category : - COG ID : - EC number : - Position : 963393 - 964934 bp Length : 1542 bp Strand : - Note : COG3504 Type IV secretory pathway, VirB9 components DNA sequence : ATGAAAAAATTTACTCTATCGCTATTTTTGTATTGCGCTTTGCTTAGTGCTGAAGAGGGTATTTTTAGGAACAACACAAG TGAAACTGATCCTACAAGTTCTTTTGAACATGGCAAAGAAAACAACAATCTTATCCCAGCAAAATCTGATAGTTTAGAAA GTTTCAAAGAGCAAGAAAACAAAGAAAAAGCCAAACAGCTTATGGATTTAAAAGCCTTACAGAGCGTGTATTTTTCTAAA AATAGAAAATTGCAAGACAATAATTTCAATGTCTTATATGTGGCAGGCAACACCAATAAAATCCGCTTACGCTATGCGAT GACTACCACTTTTATTTTTGACAATGATCCTATTATCTATGTGAGTTTAGGAGATCCTAGCGGTTTTGAACTCACTTATC CTACTAACGATCATTACGATTTATCCAACATGATAGTGATCAAACCCTTGCTTATAGGGGTGGATACAAACCTAACTGTA GTCGGAGCAAGCGGAACAATTTATACTTTTTACTTGTTTAGCACCACTTACACCAGCAAGTTTCAAAGCTATTTTTCAGT GTTTGTCTCTAATAAAAGATCTATCGGTAAGCTCAATATTTTGTCTAAGAGCGATCTAGAAAAAAGAGAGCAAGAACAAT TGGCTAAAACAGAAACAGATACGAATAGCTCTAATAAACAAGACAAGCAAAAGCTTGACTATAGAAAAATCAATTATGAG AGCAAGGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAAGTCAATCACATTTTCATTGAAAAAGCTAAAATCAA TCGTGGTTATTTGCAAAAATCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGATGCGC TTGATATAAAGGCGCTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATACGACAGAGATCAAGCCTTTTCAAAA TTTCCTTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTACATTATTGCTGA AGATGTTTCTAAAAAATGGACTTTAAGGAGCGGTAAGGAATATGTGTGCGTGAGAAGAGATAAGCACAAATACCAAAAAT CTAAGGACTTCATGCGTTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGCCAAACGAAATAACATGCATTTGATT GAAGACACTACGCCTCAACCTAAAAATGCCATTAGCGTAACGGAGTTGTTAGCTCAAATCAAAAACCAAGCTCCAAGCAA AGAATGCCGAGCCTTAAATGAAGAAGAAGTTAAGACTTTAGAAAAGGTTAAAAACATCATAAAAGCTCTCAAGCCTTTGC AAAAAGATTTGAAAAAGAACGCTAAAAAACACACCATCAAAACCCAGTATTGCGTGCCTATCCCCTATATAGAAAGACTA AAAACCACTGATGATTTAGAGAAAAATAAAAAGGGGGTGGATAACACCAAAAAACAAATTCAAGCAAACCCTATTGAAGA GATTAAAGAAAACAAGAAATGA Protein sequence : MKKFTLSLFLYCALLSAEEGIFRNNTSETDPTSSFEHGKENNNLIPAKSDSLESFKEQENKEKAKQLMDLKALQSVYFSK NRKLQDNNFNVLYVAGNTNKIRLRYAMTTTFIFDNDPIIYVSLGDPSGFELTYPTNDHYDLSNMIVIKPLLIGVDTNLTV VGASGTIYTFYLFSTTYTSKFQSYFSVFVSNKRSIGKLNILSKSDLEKREQEQLAKTETDTNSSNKQDKQKLDYRKINYE SKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQKSKHKRTWWSLWLYKKPSDDALDIKALDVFDDGKYTYFRYDRDQAFSK FPYTYKVVDGYDNPINSRVVGNYIIAEDVSKKWTLRSGKEYVCVRRDKHKYQKSKDFMRLKRLLEQDEAMKAKRNNMHLI EDTTPQPKNAISVTELLAQIKNQAPSKECRALNEEEVKTLEKVKNIIKALKPLQKDLKKNAKKHTIKTQYCVPIPYIERL KTTDDLEKNKKGVDNTKKQIQANPIEEIKENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 0.0 | 95 |
