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Name : HPSA_04700 (HPSA_04700) Accession : YP_005771529.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Virulence Product : competence protein Function : - COG functional category : - COG ID : - EC number : - Position : 962161 - 963396 bp Length : 1236 bp Strand : - Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAAAAAACTTCTTTTACTTTTAGAGCATAAGATCATAAAAATTGGCTTAATTATTGTGATTGTATTAGCTGGTTTTTT TCTTTTTTACGAACAAGAAATCAAAGAAAAAGCTGTTAATGTTTCTCAAGGCAAATTCCCTACTTCATCTTATTTGTTTC AAGCTTACGAAGGCATTAAGAATAAAATAGATACTATCAATGAAGTGAAACCAAACGATGAAACTAAAAGCGTTAATGAG AATATAGAAAAAACACAAAAAGATTTAGATGATTTTAATGCACTAGTGCAAAAATTACCAAATTTTCCCAAGGATTTTAA TAAAACACTTATTAAACCACAAAGTCCATCCTTCAACTACAATACCGCTAATGAAGAAGAAAAATCCCGTCTGATGATTT TAGCGTCTCGTATTAGCAGTCAAAAAGAAATGCAACCTCCCACCTCCATAAAAAATAGCGTTTCTCACACAAAATCCAAA GAAAAACGAGAACTTGAAAAAGAATACGGATCTAGCGGGTTTAAAAATTTTAAAAGAAAAAATGTAGCGAGTAGTGAAAA CAAACTTTTAAGAACGATTACAGCTGACAGGATGATCCCAGCCATTCTGATCACTCCTATTAGTAGTGAAATAGGGGGGA GTAAGATAGTCGCTCAGGTGGAGAGCGATATATACGCAACGATGGGTAGAGCGGTTTTAATCCCTAAAGGGAGTAGAGCC ATAGGTTATTACAACTCCAATAACAAAATAGGAGAATACCGATTAGAAATTGCTTGGAATAGGATAATCACGCCTCAAGG GGTCAATATCATACTAAGCGATGCTAAGGGAGCTGATGTCAAGGGTTATAATGGCATGATAGGCACACTCCATAACAAAT ATTGGGAACGCTATGGTATTCCTTTATCCTTAAGCACCTTGTCAAATGGGCTACTCATAGGTCTTACTAGCGGTCTTACC GAAGCGATGAAAAACAAAAGGGGTGGTTTTAACCAAAACTATTTTGGAGATTACATGATGATGCAAATGACAAGGCAAAC TGGTATCAGCCTAAATAATATTATTGCTCAAATCATGCGAGAGCAAATAAGGATTAAGCCCATTATCACTATTAGAGAAG GAAGCCATATTTTTATTAGTCCTAATACGGATATTTGGTTTCCTATCCCTAAAAACAATGAAGTCTTAGCGAAATTCTTT AATGAAGAAAAGGAGCAAAACAATGATACAAAATAG Protein sequence : MKKLLLLLEHKIIKIGLIIVIVLAGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIKNKIDTINEVKPNDETKSVNE NIEKTQKDLDDFNALVQKLPNFPKDFNKTLIKPQSPSFNYNTANEEEKSRLMILASRISSQKEMQPPTSIKNSVSHTKSK EKRELEKEYGSSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA IGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT EAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF NEEKEQNNDTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB10-1 | YP_002301098.1 | VirB10 type IV secretion protein | Virulence | cag PAI | Protein | 6e-139 | 80 |
