Gene Information

Name : HPSA_04680 (HPSA_04680)
Accession : YP_005771525.1
Strain : Helicobacter pylori SouthAfrica7
Genome accession: NC_017361
Putative virulence/resistance : Virulence
Product : VirB11 type IV secretion ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 960305 - 961246 bp
Length : 942 bp
Strand : -
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGATTTCTAATCTTTTAAAAAGTTACCTTGATGACTTTATGCCTATTTTAAGCCAGCCTAATTTAAATGAAGTGGTTTT
TAATAAAGAAAAAGAGTATTTCTTGCACCGCCCAAAGGAAAAAGTGAGGTGTTTTAATGAAAAATTTACTAATGATTATT
TGTTAGTTTTTTGTGAGCAATTAGCCATTTTTAGAAACCAAAAATTCACTCTAAAAACGCCTAAGTTAAACACTTCTTTG
CCTTACACACAAATTAGAATTAACGCATTACACCCTAGCATTATTGCTAGTTCTAATATTTCTATCAATATCAGAGTGCC
TAGCAATTTCAAGTTTGAAATTAACGCCTTTAAATTAAGTGAGAAATGTCTGGCTAAAAACATTACCTATGATTTTTTAC
TTAGCTTAGTAAGTGCAGGTAAAAATATTTTAATAAGCGGTGGCACAGCTAGTGGTAAGACTAGCTTTGTTAATTCTTTG
ATTGAAAATATTCCCAAAAACGAAAGGGTGGTTACTATTGAAGATAGTCCTGAATTAAAAATCAGTAACGAAGACCAAGT
TAATATTTTAGTGGATAAAAGTGGGAGTGGATTTTTTACTTATGAAGATGGCTTAAATGCGGCTATGAGAATGTCTCCTG
ATAGATTATTATTAGGCGAAATTGACACGCATAACACTGCGTTATTTTTGCGTTTAGCAAATACTGGGCATAGCGGAATG
ATAAGTACCTTACACGCTAATAGTGTGGTAGATGCTTTTATAGCTATTTGTCAGAATATAAACTTGAATAAAGGCGGTAA
GCCTACGCCTAAAGAAACGCTTTTAGATTATTTTTGCACTGGTATGGACTATGTTATCCAAATCAAAAAAAAAGGTAGCG
ATAGGATAATTGATGATGTTTTAAATGTTAAAAGCGAATTTAAAAAGGAGTTGATGTTATGA

Protein sequence : 
MISNLLKSYLDDFMPILSQPNLNEVVFNKEKEYFLHRPKEKVRCFNEKFTNDYLLVFCEQLAIFRNQKFTLKTPKLNTSL
PYTQIRINALHPSIIASSNISINIRVPSNFKFEINAFKLSEKCLAKNITYDFLLSLVSAGKNILISGGTASGKTSFVNSL
IENIPKNERVVTIEDSPELKISNEDQVNILVDKSGSGFFTYEDGLNAAMRMSPDRLLLGEIDTHNTALFLRLANTGHSGM
ISTLHANSVVDAFIAICQNINLNKGGKPTPKETLLDYFCTGMDYVIQIKKKGSDRIIDDVLNVKSEFKKELML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 6e-137 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPSA_04680 YP_005771525.1 VirB11 type IV secretion ATPase VFG1979 Protein 8e-47 42