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Name : HPSA_04590 (HPSA_04590) Accession : YP_005771509.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : integrase-recombinase protein Function : - COG functional category : - COG ID : - EC number : - Position : 934790 - 935866 bp Length : 1077 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGAAAAAATCAAATGATAACAACGCACTCGCTAGAAGTCAAAGGGAGTTATTTGTAGGGATTAGGGATTTTATTGTTTT TAAATTTAAGCGTATGGTTGTTTTTAATGGGGTAAGGGATTTTACAAAAATGAGATTTTTGTCCATAGAATTAGAAAAAT GCGAAAATATTAAAGATTTGGAAAAATTATGTCATACAATTTATAATCAAGGCACAAAGCATATTTTGATGATGCGTGTA TTGTTTTTATTTTTTGACTATTTTTGCAAGCATTTGAAAGTTAAGCGATTGAGATTACTCAATGAAGAAATGCTGGTGAA TTTTTTATTTGAGTTAGCCAAACAAAGAAAGATTAATTCAATGGCAAAATATGTGATGTATATAAGGCAATTTTTTGATT ACTTGGATAGGACCAAGCATTATGAATTTTATTTTAGTCTTAAAAATATAGCCTTTGCTAAACATAGGGATAATTTGCCT AAACATCTAAACTCAAAAGATTTAAAATCTTTTATATGTACTCTTATAAACTATAGAACTAGAAGTAGTTATGAAAAGAG AAATAAGTGTATTTTGCTCTTAATTATTTTGGGTGGTTTGAGAAAATCTGAGGTTTTTGATTTAGAATTGAGAAATATTG TTTTAGAAAAAGAGCATTATATCTTGCTTATAAAAGGCAAAAACAATAAAGAACGAAAAGCGTTCATTAAACGAGAAATG CTAGAAAAATCTTTAGATGAGTGGTTGAGCGATAGTAAACGATTGAGTAGTTTTAATGGGCGTTTTATATTTAAGAAATC TTTGTCTAACTATACTCAAAAGCATTGTTCAATCAGTAATTTTGTGTTAAAGATTTTTATGTTGAGTGGTATTGAAAATT TTAAACAATATGGTACAGGATTGCACCTATTTAGGCATAGTTTTGCCACTTTAGTCTATGCTGAGAGCAGGGATATTGTT TTGACTTCAAGGGCGTTAGGGCATCAGTCCTTAAGCTCCACAAAAATCTACATTCACACCGCACAAGAATATAATAAACA AGTAGCAAGCATTTTTGATAATTTATTGAGTGAGTGA Protein sequence : MKKSNDNNALARSQRELFVGIRDFIVFKFKRMVVFNGVRDFTKMRFLSIELEKCENIKDLEKLCHTIYNQGTKHILMMRV LFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYIRQFFDYLDRTKHYEFYFSLKNIAFAKHRDNLP KHLNSKDLKSFICTLINYRTRSSYEKRNKCILLLIILGGLRKSEVFDLELRNIVLEKEHYILLIKGKNNKERKAFIKREM LEKSLDEWLSDSKRLSSFNGRFIFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSFATLVYAESRDIV LTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 5e-89 | 57 |
