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Name : HPSA_04245 (HPSA_04245) Accession : YP_005771443.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 851564 - 853081 bp Length : 1518 bp Strand : - Note : COG0753 Catalase DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGTGCTCCCGTTTGGGATGACAACAATGTGATCACGGCTGGCCC TAGAGGTCCTGTTCTTTTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGAATCCCTGAAAGGG TTGTGCATGCTAAAGGAAGTGGGGCTTATGGCACTTTCACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACCGAATGCTTCTTTAGATTTTCTACTGTGGCTGGTGAAAAAGGTAGCGCGGATGCGGT GAGAGACCCAAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGCAACTGGGATTTAGTGGGCAACAACACACCGGTTT TCTTTATCCGTGATGGGATCAAATTCCCTGACTTTATCCACACTCAAAAAAGAGATCCCCAAACCAATTTGCCTAACCAC GACATGGTATGGGATTTTTGGAGCAATGTTCCTGAAAGCTTATACCAAGTTACATGGGTTATGAGCGATAGAGGTATCCC TAAATCTTTCCGCCATATGGATGGTTTTGGCAGCCACACTTTTAGCTTTATCAACGCTAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTCACACCATGCAAGGCGTTAAGCACTTGACTAATGAAGAAGCTGCAGAAGTCAGAAAGTATGATCCGGAT TCCAATCAAAGGGATTTGTTCAATGCGATCGCTAGGGGGGATTTCCCAAAATGGAAATTGTCTGTTCAAATCATGCCAGA AGAGGATGCCAAGAAGTATCGATTCCATCCGTTTGATGTTACTAAAATTTGGTATCTCCAAGATTATCCGTTGATGGAAG TGGGTGAAGTAGAATTGAATAGAAATCCAGAAAACTATTTCGCAGAAGTAGAGCAAGCGGCTTTCACTCCGGCAAATGTC GTTCCTGGAATTGGCTATAGCCCAGACAGAATGTTACAAGCTCGCTTGTTCTCTTATGGGGATACACACCGCTACCGCTT AGGCGTTAATTACCCTCAAATACCGGTTAATAAACCAAGATGCCCGTTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ATGGATACTATGGCTCTTTACAAAACTATACACCTAGCTCATTGCCTGGTTATAAAGAAGATAAGAGTGCAAGGGATCCT AAATTCAATTTAGCTCACATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGAGGATAGCGATTACTACAC CCAACCAGGCGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGAGAGTCTTTAGCTC ATGTTACTCATAAGGAAATTGTGGATAAGCAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGCCAAAGACATGCATCACACTAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDGIKFPDFIHTQKRDPQTNLPNH DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSFINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPD SNQRDLFNAIARGDFPKWKLSVQIMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGEVELNRNPENYFAEVEQAAFTPANV VPGIGYSPDRMLQARLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHAKDMHHTKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 3e-134 | 61 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 3e-92 | 53 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 6e-90 | 48 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 6e-90 | 48 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 6e-90 | 48 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 6e-90 | 48 |
