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Name : HPSA_03975 (HPSA_03975) Accession : YP_005771394.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.3 Position : 807058 - 808323 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAGATTATAAAAGACAGGGCCGGTGTGGAAATTGCCATTAAAAAAGCGGTGGTGCGAGACATTCAAAAACACAAGGGCT ATGCTTTTGAAATCAGTAACGATTTAGAAAGCTTGATAGAAGATGAAGAAATTGATATTATCGTGGAGCTTATGGGTGGG GTTGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCTTTCGTTACAGCCAATAAAGCCATGTTGGC ATATCACCGCTATGAATTAGAGCAAATCGCCAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGCGGAGGGATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCATATCCTTTCTTTTAAAGGCATTTTAAACGGCACAAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGTTTTAAGGACGCTTTAAAAGACGCGCAACATTTAGGCTATGCGGAATT AAACCCTGAATTTGACATTAAAGGCATTGATGCAGCGCACAAACTTTTGATTTTAGCGTCTTTAGCGTATGGCATTGATG CGAAATTAGAAGAAATTCTCATTGAAGGCATTGAAAAAATAGAACCAGATGACATGGAGTTTGCAAAAGAGTTTGGTTAT AGTATTAAACTTTTAGGCATCGCTAAAAAACACCAAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAACGA ATCCATGCTTTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTCATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATTGCAAGGAAAAAAAGCTCTTTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGTTTGTT GGTGAGCGATGAAAAAGGAGTTTTTTCTCAAATCAGCGCGATTTTAGCCCAAAACGATATTTCGCTCAACAATGTTTTGC AAAAAGAAATTTTGCATTCTAACAAGGCTAAAATCTTATTTTCCACGCACACCACGAGCGAAAAATCGTTTCTAAACGCC CTAAAAGAGCTTGAAAATTTAAAAAGCGTGTTGGATACCCCTAAAATGATCCGCTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIAIKKAVVRDIQKHKGYAFEISNDLESLIEDEEIDIIVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHQDCIELRVHPSMIKNESMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEILHSNKAKILFSTHTTSEKSFLNA LKELENLKSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 4e-62 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 4e-62 | 41 |
