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Name : HPSA_03645 (HPSA_03645) Accession : YP_005771330.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 742419 - 743732 bp Length : 1314 bp Strand : + Note : COG2056 Predicted permease DNA sequence : ATGCTAGAAAATAGCTCTATATGGAGCAATCCTGCCTTTGTGGCCATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATTAGCGCGACTCTCATAGCAGGGCTTATGGGAGGGCTTGGATTGACAGAGAGTTTTAATG TGATGATAGACGGCATGAAAGGCAATTTAAACATTGCATTAAGCTACATTCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAACCTCATTAAAGTCGCTTTGAGTAAATTAATAGGCTTAATGGATTACAAGCGATCCACTTTTTGCTTTCTAAT CGCTTTTATTGCATGTTTTTCGCAAAATTTAGTGCCAGTGCATATCGCTTTTATCCCTATTTTGATCCCCCCTCTTTTGC ACTTGATGAACCGACTAGAATTGGATAGAAGAGCGGTGGCTTGCGCTTTAACTTTTGGCTTGCAAGCCCCCTACTTGGTG CTTCCTGTGGGGTTTGGCTTAATCTTTCAAACCACGATTTTAGAGCAATTGAAAGCTAATGGCATGAACACTACCATAGC GCAAATCACAGGAGTGATGTGGATAGCGGGGTTAGCGATGGTTGCTGGGCTGCTTTTAGCGGTATTAACGCTATATAAAA AACCAAGGCGCTACAAAGAAAAATCTTTTGATATAGAAAATTACGCCTCGCTTCAATTAAACTACCATGACTATTTGACT TTTATAGGGATTATTGTGGCTTTTGTGATCCAATTAGCCACCGATTCTATGCCCTTAGCCGCCTTTTTGGCTTTAGCGAT CATCTTATTAGGCCGTGGTATTAAGTTTAAAGAAACAGACTCTTTGATGGACGATAGCGTGAAAATGATGGCGTTTATCG CTTTTGTGATGTTAGTGGCTAGCGGGTTTGGAGAAGTCTTGCAAAAAGTGCATGCCATAGAGGGCTTAGTGAATGTGATC ACTTATTTTGTCCAAGGGAAGCTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTTTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATCCCTATCATCGCTGTGTTTTATGTCCCTTTGTGCGCGAAATTAGGGTTTAGCACGGAATCTACAA TCTTACTCGTTGGCATAGCCGCAGCTTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCTACTTGCGGG CTTAATGCAGACAACCAGCACAACCATATCTATGACACATGCGTGCCGACTTTTTTAGTTTATAACCTCCCTTTGATTCT TTTTGGAGTGGTTGGAGCGTTATTATTAGGCTAA Protein sequence : MLENSSIWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGLTESFNVMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALSKLIGLMDYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGMNTTIAQITGVMWIAGLAMVAGLLLAVLTLYKKPRRYKEKSFDIENYASLQLNYHDYLT FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNVI TYFVQGKLLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSTESTILLVGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLILFGVVGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 4e-55 | 42 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 4e-55 | 42 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 3e-55 | 42 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 3e-55 | 42 |
