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Name : HPSA_02535 (HPSA_02535) Accession : YP_005771123.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : glutamate racemase Function : - COG functional category : - COG ID : - EC number : 5.1.1.3 Position : 516864 - 517631 bp Length : 768 bp Strand : - Note : COG0796 Glutamate racemase DNA sequence : ATGAAAATAGGCGTTTTTGATAGCGGTGTGGGAGGGTTTAGCGTTTTAAAAAGCCTTTTAAAAGTGCAATTGTTTGATGA AATCATCTATTATGGCGATAGCGCTAGAGTGCCTTATGGCACCAAAGATCCCGCCACGATCAAGCAATTTGGCTTGGAAG CTTTGGATTTTTTCAAACCCCACAAGATTGAATTATTGATTGTAGCGTGCAACACAGCGAGCGCTTTAGCTTTAGAAGAG ATGCAAAAACATTCCAAAATCCCTATTGTGGGCGTGATTGAACCCAGCATTTTAGCGATCAAACAACATGTGAAAAATAA AAACACCCCTATTTTAGTGCTAGGGACAAAAGCGACGATCCAATCTAGCGCTTATGATAACGCCCTAAAACAACAAGGCT ATTTGAATGTTTCGCATTTAGCCACTTCCCTTTTTGTGCCTTTGATTGAAGAAAATATTTTAGAGGGCGAATTACTAGAA ACTTGCATGCGTTATTATTTCGCCCCATTAAAGATTGTGCCTGAAGTGGTTATTTTAGGTTGCACGCATTTTCCCTTAAT CGCTCAAAAAATTGAAAGCTATTTTATGGAGCATTTTATCCCTTCAAAAACCCCCCTACTCATCCATTCGGGCGATGCTA TTGTAGAATATTTGCAACAAAAATACGCCCTTAAAAAGAACGCCTATGCATTCCCTAAAGTGGAATTTCATGCGAGCGGC GATGTGGTTTGGCTAGAAAAACAGGCTAAAGAATGGCTCAAATTATAA Protein sequence : MKIGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPATIKQFGLEALDFFKPHKIELLIVACNTASALALEE MQKHSKIPIVGVIEPSILAIKQHVKNKNTPILVLGTKATIQSSAYDNALKQQGYLNVSHLATSLFVPLIEENILEGELLE TCMRYYFAPLKIVPEVVILGCTHFPLIAQKIESYFMEHFIPSKTPLLIHSGDAIVEYLQQKYALKKNAYAFPKVEFHASG DVVWLEKQAKEWLKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glr | AAR03910.1 | glutamate racemase | Not tested | cag PAI | Protein | 1e-96 | 94 |
| glr | AAR03882.1 | glutamate racemase | Not tested | cag PAI | Protein | 4e-97 | 93 |
| HP0549 | NP_207344.1 | glutamate racemase | Not tested | cag PAI | Protein | 1e-96 | 92 |
| glr | AAR03971.1 | glutamate racemase | Not tested | cag PAI | Protein | 7e-97 | 92 |
| glr | AAR03940.1 | glutamate racemase | Not tested | cag PAI | Protein | 6e-97 | 92 |
| HP0549 | BAD13991.1 | - | Not tested | cag PAI | Protein | 5e-97 | 92 |
| glr | AAC44708.1 | Glr | Not tested | cag PAI | Protein | 1e-97 | 92 |
| HP0549 | BAD13881.1 | - | Not tested | cag PAI | Protein | 3e-93 | 92 |
| murI | NP_223214.1 | glutamate racemase | Not tested | cag PAI | Protein | 1e-93 | 88 |
