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Name : HPSA_02530 (HPSA_02530) Accession : YP_005771122.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 516030 - 516854 bp Length : 825 bp Strand : - Note : COG0790 FOG: TPR repeat, SEL1 subfamily DNA sequence : ATGTTTAAAGATTGTTATCGTGCTATTTTTTCTCTTTTAAAACCTTTATTGCTTTCATTAGGTTTATTGTTGTCGTTTTC GCTTTGTATAGCTGATGAACATAAATATATTAGCATAAGCGAGGATTGGGATTTATATACACGACAATATAAAACATATT ATTTTGAAAATGGTTTGGATAATTTTAATAAAGGCCAATACAAGCAAGCCTTTAAAGATTTTAGAGAGGCACAAGAATAC GGCATTGGGCTTGGCAGTGTTTATTTAGCCAAAATGTATTTGGAGGGAAAGGGCGTGAAAGTGGATTATAAAAAAGCGCA ACTCTATGCACAAAACGCTATCAAAGGGCATGGGAGCGGTATGTTAGGGGGTGCTTTAATTTTAGGATACATGCAAGCGC AAGGTTTGGGGATGAAAAAGGATTTGAAACAAGCGCTCAAAACTTACACCCATGTGGTTCGCATGCTTTCTAATAAAGGC ATAAATGTTTATAACCATACTTTCTTTGGTTTCGCTATTGCATCGCAATTTATTGATCTTTCAGGTTTGAGCGCGAATCC TAAAGAATTTGGAAAGCAATTTGAAAGACTTGAGAATCTTAAGAAAGCCATTCAAGACATCGGTGAGATAAATATTAATT TCGTAGACATTGCTGAATTTTCAAGCAATATTATTTTACTCAAACAACAAATGGGGGAAATCCTTTATAGAATTGGGATC GTCTATAAAGAAGGGCTTGGTGTCAGAAAACAAAAAAGTAGGGCTAAAAAATTCTTGCAAAAATCCGCAGAATTTGGTTA TGAAAAAGCCATGGAAGCTCTGTAG Protein sequence : MFKDCYRAIFSLLKPLLLSLGLLLSFSLCIADEHKYISISEDWDLYTRQYKTYYFENGLDNFNKGQYKQAFKDFREAQEY GIGLGSVYLAKMYLEGKGVKVDYKKAQLYAQNAIKGHGSGMLGGALILGYMQAQGLGMKKDLKQALKTYTHVVRMLSNKG INVYNHTFFGFAIASQFIDLSGLSANPKEFGKQFERLENLKKAIQDIGEININFVDIAEFSSNIILLKQQMGEILYRIGI VYKEGLGVRKQKSRAKKFLQKSAEFGYEKAMEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPB8_726 | YP_003728747.1 | chitin synthase regulatory factor 3 | Not tested | cag PAI | Protein | 7e-67 | 72 |
