Name : HPSA_01815 (HPSA_01815) Accession : YP_005770991.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 369379 - 371310 bp Length : 1932 bp Strand : - Note : COG0021 Transketolase DNA sequence : ATGCAATTGAGTAACGCTGATTTGGAACGATTAAAAAGCATGGCCAACACGCTTCGCTTTTTGTGTGCGGACATGATAGA TAAAGCCAATAGCGGGCATCCGGGCGTGTGCTTGGGGTTAGCCGATGTGATGGTGGTTTTAAGCTTGCACCTCAATCTCA ACCCCACCAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCTTATAGCTTG TTGCATTTGTGGGGCTTTGATTTGAGCTTAGAAGATTTAAAGCATTTCAGACAATTGCACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAGATCACAACAGGCCCTTTAGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGCCAATACGCTCAAACCCTTTTGAATAAAGAAACGATCTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGCTATGAGAGCGCTTCTTTAGCCGGGCATCTTCGCCTTGATAACCTCATCGTGATTTATGATAG TAACCAAATCAGCATTGAAGGCGCTATTAATATTAGTTTTAGCGAACATGTTAAAATGCGCTTTTTAGCGCAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCCATTAATGACGCTTTAGAAACAGCCAAAAAAGCCACCAAACCCACG CTTTTAATCGCTCACACGATTATTGGCAAGGGGGCTATTGGCTTAGAGGGGAGTGAAAAAACGCATGGTTCGCCATTAAA CAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTTGCATCAATCCTAATGAAAGCTTTATAATTAGCCCCAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTCAGGGGTATCAGTTTAGAAGCCTTATGGGAAAAATCCTTAAGCCCTAAAATAAAAGAA AAAATCCATGCGTTAAAGAATTTTGATTTTAATACCATCCATTACCCCACCTTTAAACAAGGCGAATCTCTAGCCACTAG GGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAAGGCTTTTTAGGGGGAAGTGCGGATTTAGCCCCCT CTAATAACACGCATTTAAAACATTCTAGCGATTTCCCTTTAGGGCAGAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTTTGCCTTTTTGCGCGACCTTTTTTGTGTTCAGCGATTATTT AATGCCAAGCATGCGTTTGAGCGCTTTAATGCGACTAAAAGCCCTTTTTATTTTCACGCATGACAGCATTGGTGTGGGCG AAGACGGGGCCACACACCAGCCCATAGAACAATTGAGCCATTTACGCGCTTTGCCCAACTTCTATGCTTTCAGGCCAAGT GACGCTTTTGAAAATACCGCTTGCATGCAAGCAGCGCTCAATTTGAATGCCCCTAGTGCTTTTATTCTATCGCGCCAGAA TTTACCCGTGCTAGATGAAGTCTCTAAAGAGCAGGTTTTAAAAGGGGCGTATGTTAAACACCCCTCTAAAGATCCTATAA TCACGCTCGTTGCAAGCGGGAGTGAGGTCTCTTTAGCTTTAGAGAGCGCTAAAATTTTAGAGCGAGAAAATATCCCCACT CAAGTCATCAGCGCGCCATGCTTTGATTTGTTGATAGAGCAAGATGAAAGCTATCTTAAAGAACTCTTTAAGGGTAAAGT CTTAGTGGTTGAAGCGAGCCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTTGCATGGATTCTTTTGGGAGTT CAGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAATATTACCAATCAAGCCAAAAGGTTACTCAAC GCATGCATTTAG Protein sequence : MQLSNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKHFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQTLLNKETISHKVYCLCGDGD LQEGISYESASLAGHLRLDNLIVIYDSNQISIEGAINISFSEHVKMRFLAQNWEVLECDGHDYQAINDALETAKKATKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENACINPNESFIISPKNKMHFEEVKVRGISLEALWEKSLSPKIKE KIHALKNFDFNTIHYPTFKQGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTHLKHSSDFPLGQNLHFGIREHAM GAITNALAAYGLFLPFCATFFVFSDYLMPSMRLSALMRLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQAALNLNAPSAFILSRQNLPVLDEVSKEQVLKGAYVKHPSKDPIITLVASGSEVSLALESAKILERENIPT QVISAPCFDLLIEQDESYLKELFKGKVLVVEASRAIEWYRFADKIICMDSFGSSAKGDKLFEKFGFSVENITNQAKRLLN ACI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-94 | 41 |