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Name : HPSA_07710 (HPSA_07710) Accession : YP_005772094.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : integrase/recombinase XercD family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1567195 - 1568187 bp Length : 993 bp Strand : - Note : COG0582 Integrase DNA sequence : ATGATACGCATCCAAAGCGTGAATGATTTACAATTGGTCTTAAAATGGCAAGATAGAGTTTTAGAGTGCCAAAGTCTTAT CGCATTAAAAGAACTCAACCACAAGCTTTATAATCAAGGCATTAGACATACAATTATGATGCAAGGCTTGTTTTTGTTCT TTGAATATTTTGATAATAGGATTAAGCTCAAATCCTTGCGCAATCTAGCAGAAGAACAGGTTATAGACTTCTTATTTGGA TTAGCTAAAAATAGGAAGTCAAGCTCTATGGCTAAATATGTGATGTATTTAAGACAATTCTTTGACTATTTAGACAGAAA AAGAAATTATAACTTTGATTTTGAACTTAAAAATCTATCGTTTGCCAAGAAAGAAACGCATTTGCCTAAACATTTGAATA AAAATGATTTTAAGGCTTTTATCTACGCTCTTCTAAAATACCATCCCAAAACCAGCTTTGAAAAACGCAATCAGTGTATT TTACTGCTTATTGTATTAGGGGGGTTAAGGAAGTTTGAAGCCTTAGATTTGGAGCTAAAAAACATTGCTTTAGAAAATAA CCACTACCGCCTTTTAATCAAAGGAAAAAACAACAAAGAGAGATACGCTTATATTGAAAAAGAGTTTTTGCAAGTTCCTC TAAATGCGTGGCTAAGCGATACTAAACGATTAAAGAGTTTTAAGGGTCGTTTTGTGTTTAAGAAAGCAAAAAACAACACC ACACAAAAAACTTGCTCTTTAAAGGGCTTTATCGCTAAAATTTTTAAGCTCTCTAATATTGATGTAAAATCTTATGGATT AGGTTTGCATCTTTTTAGGCATAGTTTTGCTACTTTTATTTATGATGAAACACAGGATTTGGTTTTAACTTCAAGAGCGT TAGGGCATAGTTCTTTGCTTTCTACTAAAATCTATATCCATACCACTCAAGAACACAATAAAAAAGTAGCTCTTGTGTTA GGGGGGTTATTAAGAAATGAAAAAAACGAGTAA Protein sequence : MIRIQSVNDLQLVLKWQDRVLECQSLIALKELNHKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLRNLAEEQVIDFLFG LAKNRKSSSMAKYVMYLRQFFDYLDRKRNYNFDFELKNLSFAKKETHLPKHLNKNDFKAFIYALLKYHPKTSFEKRNQCI LLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQVPLNAWLSDTKRLKSFKGRFVFKKAKNNT TQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVL GGLLRNEKNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 6e-142 | 98 |
