Gene Information

Name : HPSA_07620 (HPSA_07620)
Accession : YP_005772078.1
Strain : Helicobacter pylori SouthAfrica7
Genome accession: NC_017361
Putative virulence/resistance : Virulence
Product : type IV secretion system ATPase (virB11-like) protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1542101 - 1543072 bp
Length : 972 bp
Strand : +
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGAACGGTCTTTTCAATTCTAAACAAGAGCAACTCCCACTAGTATTGCAAAGATTTGTGAGAGATTTAAAGCCTTATTT
AGAAATGCCCATCAATGAAATCATGTTTAATAAAGAAAAAGAGTTTTATTTGGCTAAAGGCTCTTCTATGAGATTAGTGG
CTGATGAAAGGTTCAGTCAAGATTACTTGATCACTTTTTGCGAACAATTAGCGAATTTTAGAAATCAAATGTTTGATTTA
AAGCACCCACAGCTCGCTACTTCTATACCTTACACACAATTTCGCGTGCATGCCTTACATCCTAGTGTTATTGCTAATAG
TAATATTGCGATCAATATTAGAATACCCAGTCTTTTTAAATTCCCTATTGAGAGTTTTAAACTTTCTCAAAAATGTTTAG
AGAAAAACATGACTTACCAACAAATTATCAATGCAGTAATGGATGCAAAAAACATGCTCATCGTAGGTGGGACAAGTAGC
GGTAAGACTTCTTTTGCAAACTGCTTACTCAATTTTATTCCTTTAGAAGATAGAGTGGTTACTATAGAAGATAGTCCTGA
ATTACATATGGAAAATCCTAATCAAGTTAACATTTTGGTAGGAAAAAATGAAGATAGCTTTTTTACCTATGAGCAAGCTT
TAAACTCGGCTATGAGAATGACACCTAAAAGGCTTTTGCTTGGCGAACTTGACACAAGAAACACTTCTTTATTTTTAAGG
CTCTCTAACACAGGACATAGTGGTATGATAAGTACTTTACATGCCAATAGCACTAAAGATGCATTTGAAGCTATTTCTAT
GAATATGGCAATAAGCAGAAATGAAGTAAGCCCAACCGCTCTTTTAAATTATTTTTGTGCTGGAATGGATTATTTAATCT
ATTTGAAATTTAATTATAAAACCCATGAGAGAGAAATTACAGATTTTTTAGATGTCAAAACAGATTTAAAACAACTTTTA
GGATACGAATGA

Protein sequence : 
MNGLFNSKQEQLPLVLQRFVRDLKPYLEMPINEIMFNKEKEFYLAKGSSMRLVADERFSQDYLITFCEQLANFRNQMFDL
KHPQLATSIPYTQFRVHALHPSVIANSNIAINIRIPSLFKFPIESFKLSQKCLEKNMTYQQIINAVMDAKNMLIVGGTSS
GKTSFANCLLNFIPLEDRVVTIEDSPELHMENPNQVNILVGKNEDSFFTYEQALNSAMRMTPKRLLLGELDTRNTSLFLR
LSNTGHSGMISTLHANSTKDAFEAISMNMAISRNEVSPTALLNYFCAGMDYLIYLKFNYKTHEREITDFLDVKTDLKQLL
GYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 2e-76 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPSA_07620 YP_005772078.1 type IV secretion system ATPase (virB11-like) protein VFG1979 Protein 3e-50 45