|
Name : HPSA_07600 (HPSA_07600) Accession : YP_005772074.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Virulence Product : VirB10 type IV secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 1539861 - 1541123 bp Length : 1263 bp Strand : + Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGATGGGCTTTTTTAGAGTAATTAGAAACGCACCGATTGTAAGTATCTTTATTGTTTTGATGCTTATTTTTTGTGCATG GTTTTTCCTTTATGATGATAGCTCGCCTAAATTAGTGAGAAATTATGTTAAAGGCAAGTTTCCAATTTCTGACTATCTCT ACAAAAAAGCAGATAAAAAGGAAATCCCACCACAGAACAATGTCGTTAAACAAGAGAAAGAAGAAATTAAAAAATCTTGT AAGGGTCAGATAACAGATAATAAGGGTAATTTAATAGATGATGATTGCAATATTATAGCCACTCAAAAACAAGTTAATAA CTTACCAAATTTGCCTAAGGATTTTAATAAAACACTTATTAAACCACAAAGTCCATCCTTCAACTACAATACCGCTAATG AAGAAGAAAAATTCCGTCTGGTGATTTTAGCGTCTCGTATTAGCACTCAAAAAGAAACGCAGCCTCCAATCTCTATAAAA AATAGTGTTTCTAACACAAAATCCAAAGAAAAACGAGAACTTGAAAAAGAATACGGATCTAGCGGGTTTAAAAATTTTAA AAGAAAAAATGTAGCGAGTAGTGAAAACAAACTTTTAAGAACGATTACAGCTGACAGGATGATCCCAGCCATTCTGATCA CTCCTATTAGTAGTGAAATAGGGGGGAGTAAGATAGTCGCTCAGGTGGAGAGCGATATATACGCAACGATGGGTAGAGCG GTTTTAATCCCTAAAGGGAGTAGAGCCATAGGTTATTACAACTCCAATAACAAAATAGGAGAATACCGATTAGAAATTGC TTGGAATAGGATAATCACGCCTCAAGGGGTCAATATCATACTAAGCGATGCTAAGGGAGCTGATGTCAAGGGTTATAATG GCATGATAGGCACACTCCATAACAAATATTGGGAACGCTATGGTATTCCTTTATCCTTAAGCACCTTGTCAAATGGGCTA CTCATAGGTCTTACTAGCGGTCTTACCGAAGCGATGAAAAACAAAAGGGGTGGTTTTAACCAAAACTATTTTGGAGATTA CATGATGATGCAAATGACAAGGCAAACTGGTATCAGCCTAAATAATATTATTGCTCAAATCATGCGAGAGCAAATAAGGA TTAAGCCCATTATCACTATTAGAGAAGGAAGCCATATTTTTATTAGTCCTAATACGGATATTTGGTTTCCTATCCCTAAA AACAATGAAGTCTTAGCGAAATTCTTTAATGAAGAAAAGGAGCAAAACAATGATACAAAATAG Protein sequence : MMGFFRVIRNAPIVSIFIVLMLIFCAWFFLYDDSSPKLVRNYVKGKFPISDYLYKKADKKEIPPQNNVVKQEKEEIKKSC KGQITDNKGNLIDDDCNIIATQKQVNNLPNLPKDFNKTLIKPQSPSFNYNTANEEEKFRLVILASRISTQKETQPPISIK NSVSNTKSKEKRELEKEYGSSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRA VLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGL LIGLTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPK NNEVLAKFFNEEKEQNNDTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB10-1 | YP_002301098.1 | VirB10 type IV secretion protein | Virulence | cag PAI | Protein | 3e-179 | 93 |
