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Name : HPSA_07590 (HPSA_07590) Accession : YP_005772072.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Virulence Product : VirB8 type IV secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 1537169 - 1538332 bp Length : 1164 bp Strand : + Note : COG3736 Type IV secretory pathway, component VirB8 DNA sequence : ATGTCAAAAAGAAGCAAAGCTTTAGAACAATTTCATGGCGATTTAAAAAATTTAGAATTACAAACTAAAAGGCGCATGGA TTTGTGGGGCGATCTAAAAGAGAATGAAGAACAAACTTTGCTTTTAGAAGAAATTGAAAATGAATTAAAACAATTAGAAA ACAAAAAGAATCTTAAAGCAGGCAACAACACAAAAGAAGAAAATCAAGACACTCAAGAAAACCAGCCTAACGATTTGTTT TCTTTGCCATTGCCCACTCAAACCATCATCAGTGAAACTAAAGAGTTTGTAGAAGAGCCTATGACAGAAACAGAAGAAAA AGAAACGCCCCAAAACGAGACAATCCAAGAAAAAAAAGAAAGAATTTTTAAAAACTTTTTCTCTAGAATAGGATTTGATA AAAGTATTGCCCCCACAATGCTCTTTGAAGAAGTGAGAGATGCAAGCGTTATCTATCATTTAGAGAAAAAATTAGGCGAT TATATCTTTTATGTAGCGTGTTTCTTCTTTGGCACAACAGCGTTGCTTATTATCTTACTGATTATTCTGTTGCCCTTAAA ACAAAAAGAGCCGTATTTAGTGCAATTTTCTAACAATAAAGAAAATTTTGCTTTAGTTCAAAAGGCAGATAGCACCATTA CAGCCAATAAAGCTCTTATTCGTTCATTAGTGGGAGCGTATGTGCTAAATAGGGAAAGCATTACTCATATTAAACAACAT GAAAAAATGCGTCAAAACACCATTAAAGAGCAAAGTTCCAATGAGGTATGGTATGAATTTGAAAAACTCATCGCTCATTA TGACAGCATTTACACTAATCCTTTACTCACAAGAAAAGTAAAGATTGCAAATATCTATTTAGATAAAGATTTAGCCTATA TTGACATTGAAGTGAGCTTGTATCATAGTGGAGAATTAGAGAGCTTAAAGCGCTATAAAGTGGTGATGAGTTTTGAATTC AAAAAGCAAGAAATCAATTTTGACTCCATGTCTTTAAACCCTACAGGCTTTATTGTTACAGGTTATGATGTAACTGAAAT TGCGATTTTAAAAGACTTGGATGAAAAAAATAAAGTCAAAGATGATGGTGTGAAATCTAGGATTATCCATACCGAGAAAA AAGACCCTCACATGAGCCAATATAAAGATGTTAAGGAACAATAA Protein sequence : MSKRSKALEQFHGDLKNLELQTKRRMDLWGDLKENEEQTLLLEEIENELKQLENKKNLKAGNNTKEENQDTQENQPNDLF SLPLPTQTIISETKEFVEEPMTETEEKETPQNETIQEKKERIFKNFFSRIGFDKSIAPTMLFEEVRDASVIYHLEKKLGD YIFYVACFFFGTTALLIILLIILLPLKQKEPYLVQFSNNKENFALVQKADSTITANKALIRSLVGAYVLNRESITHIKQH EKMRQNTIKEQSSNEVWYEFEKLIAHYDSIYTNPLLTRKVKIANIYLDKDLAYIDIEVSLYHSGELESLKRYKVVMSFEF KKQEINFDSMSLNPTGFIVTGYDVTEIAILKDLDEKNKVKDDGVKSRIIHTEKKDPHMSQYKDVKEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB8-1 | YP_002301100.1 | VirB8 type IV secretion protein | Virulence | cag PAI | Protein | 2e-140 | 96 |
